RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 IRX5P78411 483 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQA1-204ENST00000422863 DDB1Q16531 1140 aa11.1□□□□□ -0.63
HLA-DQA1-204ENST00000422863 CDK19Q9BWU1 502 aa11.1□□□□□ -0.63
HLA-DQA1-204ENST00000422863 STK32BQ9NY57 414 aa11.1□□□□□ -0.63
HLA-DQA1-204ENST00000422863 ATP7BP35670 1465 aa11.1□□□□□ -0.63
HLA-DQA1-204ENST00000422863 COL5A2P05997 1499 aaPredicted RBP11.09□□□□□ -0.63
HLA-DQA1-204ENST00000422863 MARCH10Q8NA82 808 aaPredicted RBP11.09□□□□□ -0.63
HLA-DQA1-204ENST00000422863 TOPAZ1Q8N9V7 1692 aa11.08□□□□□ -0.64
HLA-DQA1-204ENST00000422863 GIGYF1O75420 1035 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQA1-204ENST00000422863 GCP02774 474 aa11.08□□□□□ -0.64
HLA-DQA1-204ENST00000422863 SLC15A2Q16348 729 aa11.08□□□□□ -0.64
HLA-DQA1-204ENST00000422863 GPR162Q16538 588 aa11.08□□□□□ -0.64
HLA-DQA1-204ENST00000422863 TXNRD1Q16881 649 aa11.08□□□□□ -0.64
HLA-DQA1-204ENST00000422863 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
HLA-DQA1-204ENST00000422863 KRTAP3-3Q9BYR6 98 aa11.08□□□□□ -0.64
HLA-DQA1-204ENST00000422863 KRTAP3-2Q9BYR7 98 aa11.08□□□□□ -0.64
HLA-DQA1-204ENST00000422863 TOM1L2Q6ZVM7 507 aa11.07□□□□□ -0.64
HLA-DQA1-204ENST00000422863 CRB1P82279 1406 aa11.07□□□□□ -0.64
HLA-DQA1-204ENST00000422863 COL18A1P39060 1754 aa11.06□□□□□ -0.64
HLA-DQA1-204ENST00000422863 C11orf95C9JLR9 678 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQA1-204ENST00000422863 ARXQ96QS3 562 aa11.06□□□□□ -0.64
HLA-DQA1-204ENST00000422863 MTFR1LQ9H019 292 aa11.06□□□□□ -0.64
HLA-DQA1-204ENST00000422863 CPDO75976 1380 aa11.05□□□□□ -0.64
HLA-DQA1-204ENST00000422863 NLRP13Q86W25 1043 aa11.05□□□□□ -0.64
HLA-DQA1-204ENST00000422863 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
HLA-DQA1-204ENST00000422863 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
HLA-DQA1-204ENST00000422863 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.05□□□□□ -0.64
HLA-DQA1-204ENST00000422863 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
HLA-DQA1-204ENST00000422863 ACSBG1Q96GR2 724 aa11.04□□□□□ -0.64
HLA-DQA1-204ENST00000422863 USP19O94966 1318 aa11.04□□□□□ -0.64
HLA-DQA1-204ENST00000422863 SHANK3Q9BYB0 1731 aa11.04□□□□□ -0.64
HLA-DQA1-204ENST00000422863 POLR3AO14802 1390 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQA1-204ENST00000422863 BTAF1O14981 1849 aa11.03□□□□□ -0.64
HLA-DQA1-204ENST00000422863 PLEKHG3A1L390 1219 aa11.03□□□□□ -0.64
HLA-DQA1-204ENST00000422863 EMP3P54852 163 aa11.03□□□□□ -0.64
HLA-DQA1-204ENST00000422863 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
HLA-DQA1-204ENST00000422863 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.64
HLA-DQA1-204ENST00000422863 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
HLA-DQA1-204ENST00000422863 NLRP6P59044 892 aa11.02□□□□□ -0.65
HLA-DQA1-204ENST00000422863 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
HLA-DQA1-204ENST00000422863 OCEL1Q9H607 264 aa11.02□□□□□ -0.65
HLA-DQA1-204ENST00000422863 EXOC5O00471 708 aa11.01□□□□□ -0.65
HLA-DQA1-204ENST00000422863 SOX12O15370 315 aa11.01□□□□□ -0.65
HLA-DQA1-204ENST00000422863 CSB-PGBD3P0DP91 1061 aa11□□□□□ -0.65
HLA-DQA1-204ENST00000422863 ZNF827Q17R98 1081 aa11□□□□□ -0.65
HLA-DQA1-204ENST00000422863 HS3ST6Q96QI5 342 aa11□□□□□ -0.65
HLA-DQA1-204ENST00000422863 CABP2Q9NPB3 220 aa11□□□□□ -0.65
HLA-DQA1-204ENST00000422863 NHSQ6T4R5 1651 aa11□□□□□ -0.65
HLA-DQA1-204ENST00000422863 PPIP5K1Q6PFW1 1433 aa11□□□□□ -0.65
HLA-DQA1-204ENST00000422863 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
HLA-DQA1-204ENST00000422863 NLGN2Q8NFZ4 835 aa10.99□□□□□ -0.65
HLA-DQA1-204ENST00000422863 WDR17Q8IZU2 1322 aa10.99□□□□□ -0.65
HLA-DQA1-204ENST00000422863 AATKQ6ZMQ8 1374 aa10.99□□□□□ -0.65
HLA-DQA1-204ENST00000422863 PAPPAQ13219 1627 aa10.98□□□□□ -0.65
HLA-DQA1-204ENST00000422863 PIK3C2AO00443 1686 aa10.98□□□□□ -0.65
HLA-DQA1-204ENST00000422863 COL24A1Q17RW2 1714 aa10.98□□□□□ -0.65
HLA-DQA1-204ENST00000422863 MIER1Q8N108 512 aa10.97□□□□□ -0.65
HLA-DQA1-204ENST00000422863 LRRC4BQ9NT99 713 aa10.97□□□□□ -0.65
HLA-DQA1-204ENST00000422863 QSER1Q2KHR3 1735 aa10.97□□□□□ -0.65
HLA-DQA1-204ENST00000422863 SLIT3O75094 1523 aa10.96□□□□□ -0.65
HLA-DQA1-204ENST00000422863 BCL9O00512 1426 aa10.96□□□□□ -0.65
HLA-DQA1-204ENST00000422863 MAP3K5Q99683 1374 aa10.96□□□□□ -0.65
HLA-DQA1-204ENST00000422863 YBX3P16989 372 aaKnown RBP eCLIP10.96□□□□□ -0.65
HLA-DQA1-204ENST00000422863 KCNQ4P56696 695 aa10.96□□□□□ -0.65
HLA-DQA1-204ENST00000422863 CDCA7Q9BWT1 371 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQA1-204ENST00000422863 CARD10Q9BWT7 1032 aa10.96□□□□□ -0.65
HLA-DQA1-204ENST00000422863 CABP1Q9NZU7 370 aa10.96□□□□□ -0.65
HLA-DQA1-204ENST00000422863 FAM205CA6NFA0 338 aa10.95□□□□□ -0.66
HLA-DQA1-204ENST00000422863 POLD1P28340 1107 aa10.95□□□□□ -0.66
HLA-DQA1-204ENST00000422863 ZNF526Q8TF50 670 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQA1-204ENST00000422863 NBPF1Q3BBV0 1214 aa10.94□□□□□ -0.66
HLA-DQA1-204ENST00000422863 ARHGEF25Q86VW2 580 aa10.94□□□□□ -0.66
HLA-DQA1-204ENST00000422863 QRICH2Q9H0J4 1663 aa10.94□□□□□ -0.66
HLA-DQA1-204ENST00000422863 USP6P35125 1406 aa10.93□□□□□ -0.66
HLA-DQA1-204ENST00000422863 CPSF1Q10570 1443 aaKnown RBP10.93□□□□□ -0.66
HLA-DQA1-204ENST00000422863 LTN1O94822 1766 aa10.93□□□□□ -0.66
HLA-DQA1-204ENST00000422863 ATP10DQ9P241 1426 aa10.92□□□□□ -0.66
HLA-DQA1-204ENST00000422863 TRPM1Q7Z4N2 1603 aa10.91□□□□□ -0.66
HLA-DQA1-204ENST00000422863 PNPLA7Q6ZV29 1317 aa10.91□□□□□ -0.66
HLA-DQA1-204ENST00000422863 HSPA6P17066 643 aa10.91□□□□□ -0.66
HLA-DQA1-204ENST00000422863 GPBP1L1Q9HC44 474 aaPredicted RBP10.91□□□□□ -0.66
HLA-DQA1-204ENST00000422863 TFCP2L1Q9NZI6 479 aa10.91□□□□□ -0.66
HLA-DQA1-204ENST00000422863 KIAA1210Q9ULL0 1709 aa10.91□□□□□ -0.66
HLA-DQA1-204ENST00000422863 TNS2Q63HR2 1409 aa10.91□□□□□ -0.66
HLA-DQA1-204ENST00000422863 BRD4O60885 1362 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQA1-204ENST00000422863 GRIN3BO60391 1043 aa10.9□□□□□ -0.66
HLA-DQA1-204ENST00000422863 SLC16A10Q8TF71 515 aa10.9□□□□□ -0.66
HLA-DQA1-204ENST00000422863 NLRP2Q9NX02 1062 aa10.9□□□□□ -0.66
HLA-DQA1-204ENST00000422863 CCDC7Q96M83 1385 aa10.9□□□□□ -0.67
HLA-DQA1-204ENST00000422863 RAB3GAP2Q9H2M9 1393 aa10.9□□□□□ -0.67
HLA-DQA1-204ENST00000422863 LY75O60449 1722 aa10.89□□□□□ -0.67
HLA-DQA1-204ENST00000422863 TTC21BQ7Z4L5 1316 aa10.89□□□□□ -0.67
HLA-DQA1-204ENST00000422863 CENPJQ9HC77 1338 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQA1-204ENST00000422863 MSL1Q68DK7 614 aa10.89□□□□□ -0.67
HLA-DQA1-204ENST00000422863 WWC3Q9ULE0 1092 aa10.89□□□□□ -0.67
HLA-DQA1-204ENST00000422863 RGPD2P0DJD1 1756 aa10.89□□□□□ -0.67
HLA-DQA1-204ENST00000422863 NUBP1P53384 320 aa10.88□□□□□ -0.67
HLA-DQA1-204ENST00000422863 KCNH5Q8NCM2 988 aa10.88□□□□□ -0.67
HLA-DQA1-204ENST00000422863 DDX54Q8TDD1 881 aaKnown RBP10.88□□□□□ -0.67
HLA-DQA1-204ENST00000422863 SYTL4Q96C24 671 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms