RNA–Protein interactions for RNA: ENST00000413233.1

TPM3P1-201, Transcript of tropomyosin 3 pseudogene 1, humanhuman

BASIC

Gene TPM3P1, Length 747 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P1-201ENST00000413233 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
TPM3P1-201ENST00000413233 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
TPM3P1-201ENST00000413233 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
TPM3P1-201ENST00000413233 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
TPM3P1-201ENST00000413233 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
TPM3P1-201ENST00000413233 EIF4A2Q14240 407 aaKnown RBP12.87□□□□□ -0.35
TPM3P1-201ENST00000413233 CDCA7Q9BWT1 371 aaPredicted RBP12.87□□□□□ -0.35
TPM3P1-201ENST00000413233 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
TPM3P1-201ENST00000413233 CAMTA1Q9Y6Y1 1673 aa12.86□□□□□ -0.35
TPM3P1-201ENST00000413233 SOX12O15370 315 aa12.86□□□□□ -0.35
TPM3P1-201ENST00000413233 WDR43Q15061 677 aaKnown RBP eCLIP12.86□□□□□ -0.35
TPM3P1-201ENST00000413233 ANKRD24Q8TF21 1146 aa12.86□□□□□ -0.35
TPM3P1-201ENST00000413233 CARD10Q9BWT7 1032 aa12.86□□□□□ -0.35
TPM3P1-201ENST00000413233 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
TPM3P1-201ENST00000413233 CRB1P82279 1406 aa12.86□□□□□ -0.35
TPM3P1-201ENST00000413233 FBLN1P23142 703 aa12.85□□□□□ -0.35
TPM3P1-201ENST00000413233 EVA1CP58658 441 aa12.85□□□□□ -0.35
TPM3P1-201ENST00000413233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM3P1-201ENST00000413233 CAMKK2Q96RR4 588 aa12.84□□□□□ -0.35
TPM3P1-201ENST00000413233 NEFMP07197 916 aa12.83□□□□□ -0.36
TPM3P1-201ENST00000413233 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
TPM3P1-201ENST00000413233 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
TPM3P1-201ENST00000413233 EYA1Q99502 592 aa12.83□□□□□ -0.36
TPM3P1-201ENST00000413233 SPATA31A5Q5VU36 1347 aa12.83□□□□□ -0.36
TPM3P1-201ENST00000413233 SPATA31A7Q8IWB4 1347 aa12.83□□□□□ -0.36
TPM3P1-201ENST00000413233 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
TPM3P1-201ENST00000413233 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
TPM3P1-201ENST00000413233 POTEHQ6S545 545 aa12.82□□□□□ -0.36
TPM3P1-201ENST00000413233 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
TPM3P1-201ENST00000413233 TRIM37O94972 964 aa12.81□□□□□ -0.36
TPM3P1-201ENST00000413233 U2AF1L5P0DN76 240 aaPredicted RBP12.81□□□□□ -0.36
TPM3P1-201ENST00000413233 U2AF1Q01081 240 aaKnown RBP eCLIP12.81□□□□□ -0.36
TPM3P1-201ENST00000413233 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
TPM3P1-201ENST00000413233 APBA3O96018 575 aa12.8□□□□□ -0.36
TPM3P1-201ENST00000413233 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
TPM3P1-201ENST00000413233 TCP11L2Q8N4U5 519 aa12.8□□□□□ -0.36
TPM3P1-201ENST00000413233 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
TPM3P1-201ENST00000413233 PPP1R1BQ9UD71 204 aaPredicted RBP12.8□□□□□ -0.36
TPM3P1-201ENST00000413233 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
TPM3P1-201ENST00000413233 U2SURPO15042 1029 aaKnown RBP12.79□□□□□ -0.36
TPM3P1-201ENST00000413233 CCDC184Q52MB2 194 aa12.79□□□□□ -0.36
TPM3P1-201ENST00000413233 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
TPM3P1-201ENST00000413233 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
TPM3P1-201ENST00000413233 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
TPM3P1-201ENST00000413233 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
TPM3P1-201ENST00000413233 NLRP2Q9NX02 1062 aa12.79□□□□□ -0.36
TPM3P1-201ENST00000413233 SPATA31A1Q5TZJ5 1347 aa12.79□□□□□ -0.36
TPM3P1-201ENST00000413233 ZBTB7CA1YPR0 619 aa12.78□□□□□ -0.36
TPM3P1-201ENST00000413233 ZBTB22O15209 634 aa12.78□□□□□ -0.36
TPM3P1-201ENST00000413233 HTATSF1O43719 755 aaKnown RBP12.78□□□□□ -0.36
TPM3P1-201ENST00000413233 SULT6B1Q6IMI4 303 aa12.78□□□□□ -0.36
TPM3P1-201ENST00000413233 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
TPM3P1-201ENST00000413233 RAPGEF4Q8WZA2 1011 aa12.78□□□□□ -0.36
TPM3P1-201ENST00000413233 IL2RBP14784 551 aa12.77□□□□□ -0.37
TPM3P1-201ENST00000413233 CCDC27Q2M243 656 aa12.77□□□□□ -0.37
TPM3P1-201ENST00000413233 GAS2L2Q8NHY3 880 aa12.77□□□□□ -0.37
TPM3P1-201ENST00000413233 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
TPM3P1-201ENST00000413233 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
TPM3P1-201ENST00000413233 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
TPM3P1-201ENST00000413233 LTV1Q96GA3 475 aaPredicted RBP12.76□□□□□ -0.37
TPM3P1-201ENST00000413233 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
TPM3P1-201ENST00000413233 STRN4Q9NRL3 753 aa12.76□□□□□ -0.37
TPM3P1-201ENST00000413233 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
TPM3P1-201ENST00000413233 OVOS2A0A0G2JMS6 1433 aa12.75□□□□□ -0.37
TPM3P1-201ENST00000413233 KCNQ2O43526 872 aa12.75□□□□□ -0.37
TPM3P1-201ENST00000413233 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
TPM3P1-201ENST00000413233 RGPD5Q99666 1765 aa12.75□□□□□ -0.37
TPM3P1-201ENST00000413233 SPG7Q9UQ90 795 aa12.75□□□□□ -0.37
TPM3P1-201ENST00000413233 UTRNP46939 3433 aa12.74□□□□□ -0.37
TPM3P1-201ENST00000413233 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
TPM3P1-201ENST00000413233 PRKAR2BP31323 418 aa12.74□□□□□ -0.37
TPM3P1-201ENST00000413233 FAM9BQ8IZU0 186 aa12.74□□□□□ -0.37
TPM3P1-201ENST00000413233 CASZ1Q86V15 1759 aa12.74□□□□□ -0.37
TPM3P1-201ENST00000413233 CHD4Q14839 1912 aa12.73□□□□□ -0.37
TPM3P1-201ENST00000413233 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
TPM3P1-201ENST00000413233 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
TPM3P1-201ENST00000413233 PARP4Q9UKK3 1724 aaKnown RBP12.73□□□□□ -0.37
TPM3P1-201ENST00000413233 BCL9O00512 1426 aa12.72□□□□□ -0.37
TPM3P1-201ENST00000413233 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
TPM3P1-201ENST00000413233 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
TPM3P1-201ENST00000413233 HMOX1P09601 288 aa12.72□□□□□ -0.37
TPM3P1-201ENST00000413233 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
TPM3P1-201ENST00000413233 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
TPM3P1-201ENST00000413233 USP35Q9P2H5 1018 aa12.72□□□□□ -0.37
TPM3P1-201ENST00000413233 SENP3-EIF4A1A0A087X0R7 540 aa12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 EXOC5O00471 708 aa12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 CALD1Q05682 793 aaKnown RBP12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 NFE2L2Q16236 605 aa12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 IFNL2Q8IZJ0 200 aa12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 ZNF784Q8NCA9 323 aaPredicted RBP12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
TPM3P1-201ENST00000413233 TNS2Q63HR2 1409 aa12.71□□□□□ -0.38
TPM3P1-201ENST00000413233 SBF2Q86WG5 1849 aa12.7□□□□□ -0.38
TPM3P1-201ENST00000413233 POLA2Q14181 598 aa12.7□□□□□ -0.38
TPM3P1-201ENST00000413233 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
TPM3P1-201ENST00000413233 MEGF6O75095 1541 aa12.7□□□□□ -0.38
TPM3P1-201ENST00000413233 PKD1L3Q7Z443 1732 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms