RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 DBN1Q16643 649 aa4.42□□□□□ -1.7
RNU6-1228P-201ENST00000391014 GPAT2Q6NUI2 795 aa4.42□□□□□ -1.7
RNU6-1228P-201ENST00000391014 MARSP56192 900 aaKnown RBP4.41□□□□□ -1.7
RNU6-1228P-201ENST00000391014 ZNF837Q96EG3 531 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1228P-201ENST00000391014 A0A1W2PRU2 124 aa4.4□□□□□ -1.71
RNU6-1228P-201ENST00000391014 RNF225M0QZC1 329 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1228P-201ENST00000391014 ITGB2P05107 769 aa4.4□□□□□ -1.71
RNU6-1228P-201ENST00000391014 DDRGK1Q96HY6 314 aa4.4□□□□□ -1.71
RNU6-1228P-201ENST00000391014 CNTNAP5Q8WYK1 1306 aa4.4□□□□□ -1.71
RNU6-1228P-201ENST00000391014 ATP5J2-PTCD1G3V325 749 aa4.39□□□□□ -1.71
RNU6-1228P-201ENST00000391014 FBXO45P0C2W1 286 aa4.39□□□□□ -1.71
RNU6-1228P-201ENST00000391014 POU4F2Q12837 409 aa4.39□□□□□ -1.71
RNU6-1228P-201ENST00000391014 GJD4Q96KN9 370 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1228P-201ENST00000391014 DNMT3AQ9Y6K1 912 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1228P-201ENST00000391014 MEN1O00255 615 aa4.38□□□□□ -1.71
RNU6-1228P-201ENST00000391014 SCTRP47872 440 aa4.38□□□□□ -1.71
RNU6-1228P-201ENST00000391014 SEPT12Q8IYM1 358 aa4.38□□□□□ -1.71
RNU6-1228P-201ENST00000391014 TRIM22Q8IYM9 498 aa4.38□□□□□ -1.71
RNU6-1228P-201ENST00000391014 GTPBP3Q969Y2 492 aaKnown RBP4.38□□□□□ -1.71
RNU6-1228P-201ENST00000391014 ACDQ96AP0 544 aa4.38□□□□□ -1.71
RNU6-1228P-201ENST00000391014 SCARF2Q96GP6 870 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1228P-201ENST00000391014 PCDHB9Q9Y5E1 797 aa4.38□□□□□ -1.71
RNU6-1228P-201ENST00000391014 IGF1RP08069 1367 aa4.38□□□□□ -1.71
RNU6-1228P-201ENST00000391014 ZBBXA8MT70 800 aa4.37□□□□□ -1.71
RNU6-1228P-201ENST00000391014 THBS1P07996 1170 aa4.37□□□□□ -1.71
RNU6-1228P-201ENST00000391014 ERVK-9P63128 1117 aa4.37□□□□□ -1.71
RNU6-1228P-201ENST00000391014 KANK3Q6NY19 840 aa4.37□□□□□ -1.71
RNU6-1228P-201ENST00000391014 RIPOR1Q6ZS17 1223 aa4.37□□□□□ -1.71
RNU6-1228P-201ENST00000391014 GRIP2Q9C0E4 1043 aa4.37□□□□□ -1.71
RNU6-1228P-201ENST00000391014 MBIPQ9NS73 344 aa4.37□□□□□ -1.71
RNU6-1228P-201ENST00000391014 GPR37L1O60883 481 aa4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 GPC1P35052 558 aa4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 MAP3K10Q02779 954 aa4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 PLA2G4EQ3MJ16 856 aa4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 CC2D2BQ6DHV5 1058 aa4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 PNMA1Q8ND90 353 aa4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 DCAF5Q96JK2 942 aa4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 GAS2L1Q99501 681 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 OSBPL3Q9H4L5 887 aa4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 DYRK1BQ9Y463 629 aa4.36□□□□□ -1.71
RNU6-1228P-201ENST00000391014 IGHA1P01876 353 aa4.35□□□□□ -1.71
RNU6-1228P-201ENST00000391014 BCRP11274 1271 aa4.35□□□□□ -1.71
RNU6-1228P-201ENST00000391014 TMEM259Q4ZIN3 620 aa4.35□□□□□ -1.71
RNU6-1228P-201ENST00000391014 NBPF10Q6P3W6 841 aaKnown RBP4.35□□□□□ -1.71
RNU6-1228P-201ENST00000391014 C1orf229Q6ZS94 237 aaPredicted RBP4.35□□□□□ -1.71
RNU6-1228P-201ENST00000391014 NBPF15Q8N660 670 aa4.35□□□□□ -1.71
RNU6-1228P-201ENST00000391014 TRIM52Q96A61 297 aa4.35□□□□□ -1.71
RNU6-1228P-201ENST00000391014 SPATA31C2B4DYI2 1134 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 TRAK2O60296 914 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 FOXK2Q01167 660 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 CLN3Q13286 438 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 SLC27A3Q5K4L6 730 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 IL27Q8NEV9 243 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 GMCL1Q96IK5 515 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 ARHGEF10LQ9HCE6 1279 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 ENAMQ9NRM1 1142 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 RAB6BQ9NRW1 208 aa4.34□□□□□ -1.71
RNU6-1228P-201ENST00000391014 H7C1W4 665 aa4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 IL2RAP01589 272 aa4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 SNRPNP63162 240 aaKnown RBP4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 TSGA10IPQ3SY00 556 aa4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 BEND7Q8N7W2 519 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 NEDD1Q8NHV4 660 aa4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 PCMTD1Q96MG8 357 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 NLRP3Q96P20 1036 aa4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 SPOCK3Q9BQ16 436 aa4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 CDCA7Q9BWT1 371 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 GOPCQ9HD26 462 aa4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 TIMMDC1Q9NPL8 285 aa4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 PCDHB11Q9Y5F2 797 aa4.33□□□□□ -1.72
RNU6-1228P-201ENST00000391014 SHISA8B8ZZ34 492 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 OIP5O43482 229 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 STAU1O95793 577 aaKnown RBP4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 F11P03951 625 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 PROCP04070 461 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 MX2P20592 715 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 PHKA2P46019 1235 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 CENPCQ03188 943 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 NR1H3Q13133 447 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 UBAP2LQ14157 1087 aaKnown RBP4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 FOXR1Q6PIV2 292 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 NUCKS1Q9H1E3 243 aaKnown RBP4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 HRH3Q9Y5N1 445 aa4.32□□□□□ -1.72
RNU6-1228P-201ENST00000391014 KRBA1A5PL33 1030 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 PHF20L1A8MW92 1017 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 WASLO00401 505 aaPredicted RBP4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 MSTNO14793 375 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 ADAM23O75077 832 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 WDR44Q5JSH3 913 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 RNF20Q5VTR2 975 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 TAS1R3Q7RTX0 852 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 CYP2U1Q7Z449 544 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 MTMR14Q8NCE2 650 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 CNKSR1Q969H4 720 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 KLRG1Q96E93 195 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 TRERF1Q96PN7 1200 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 CCDC85AQ96PX6 553 aaPredicted RBP4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 GPAMQ9HCL2 828 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 SNRKQ9NRH2 765 aa4.31□□□□□ -1.72
RNU6-1228P-201ENST00000391014 C2CD2LO14523 706 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms