RNA–Protein interactions for RNA: ENST00000377619.9

COMMD6-204, Transcript of COMM domain containing 6, humanhuman

TSL 2 BASIC

Gene COMMD6, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-204ENST00000377619 NBPF20Q3BBV1 942 aa9.37□□□□□ -0.91
COMMD6-204ENST00000377619 PPP2R2DQ66LE6 453 aa9.37□□□□□ -0.91
COMMD6-204ENST00000377619 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.37□□□□□ -0.91
COMMD6-204ENST00000377619 ERVH48-1M5A8F1 160 aa9.36□□□□□ -0.91
COMMD6-204ENST00000377619 ADAMTS2O95450 1211 aa9.36□□□□□ -0.91
COMMD6-204ENST00000377619 PTGIRP43119 386 aa9.36□□□□□ -0.91
COMMD6-204ENST00000377619 FOXD4L5Q5VV16 416 aaPredicted RBP9.36□□□□□ -0.91
COMMD6-204ENST00000377619 LYPD4Q6UWN0 246 aa9.36□□□□□ -0.91
COMMD6-204ENST00000377619 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
COMMD6-204ENST00000377619 SH3D19Q5HYK7 790 aa9.35□□□□□ -0.91
COMMD6-204ENST00000377619 GPAT2Q6NUI2 795 aa9.35□□□□□ -0.91
COMMD6-204ENST00000377619 DZIP3Q86Y13 1208 aaKnown RBP9.35□□□□□ -0.91
COMMD6-204ENST00000377619 CUEDC1Q9NWM3 386 aaPredicted RBP9.34□□□□□ -0.91
COMMD6-204ENST00000377619 DNMT3AQ9Y6K1 912 aaPredicted RBP9.34□□□□□ -0.91
COMMD6-204ENST00000377619 LYSMD3Q7Z3D4 306 aa9.33□□□□□ -0.92
COMMD6-204ENST00000377619 SCARF2Q96GP6 870 aaPredicted RBP9.33□□□□□ -0.92
COMMD6-204ENST00000377619 HMX1Q9NP08 348 aaPredicted RBP9.33□□□□□ -0.92
COMMD6-204ENST00000377619 SRSF11Q05519 484 aaKnown RBP9.32□□□□□ -0.92
COMMD6-204ENST00000377619 KANK3Q6NY19 840 aa9.32□□□□□ -0.92
COMMD6-204ENST00000377619 PRICKLE2Q7Z3G6 844 aa9.32□□□□□ -0.92
COMMD6-204ENST00000377619 FAM117AQ9C073 453 aa9.32□□□□□ -0.92
COMMD6-204ENST00000377619 ESPNB1AK53 854 aa9.31□□□□□ -0.92
COMMD6-204ENST00000377619 CELA2BP08218 269 aaPredicted RBP9.31□□□□□ -0.92
COMMD6-204ENST00000377619 RHOQP17081 205 aa9.31□□□□□ -0.92
COMMD6-204ENST00000377619 GAS6Q14393 721 aa9.31□□□□□ -0.92
COMMD6-204ENST00000377619 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
COMMD6-204ENST00000377619 MAP3K10Q02779 954 aa9.3□□□□□ -0.92
COMMD6-204ENST00000377619 KDM4CQ9H3R0 1056 aa9.3□□□□□ -0.92
COMMD6-204ENST00000377619 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
COMMD6-204ENST00000377619 CYLDQ9NQC7 956 aa9.3□□□□□ -0.92
COMMD6-204ENST00000377619 NCAPD3P42695 1498 aa9.29□□□□□ -0.92
COMMD6-204ENST00000377619 IGHA1P01876 353 aa9.29□□□□□ -0.92
COMMD6-204ENST00000377619 RNF144AP50876 292 aaPredicted RBP9.29□□□□□ -0.92
COMMD6-204ENST00000377619 USP17L8P0C7I0 530 aa9.28□□□□□ -0.92
COMMD6-204ENST00000377619 DDRGK1Q96HY6 314 aa9.28□□□□□ -0.92
COMMD6-204ENST00000377619 ABCC8Q09428 1581 aa9.27□□□□□ -0.93
COMMD6-204ENST00000377619 GPR25O00155 361 aa9.26□□□□□ -0.93
COMMD6-204ENST00000377619 FOXK2Q01167 660 aa9.26□□□□□ -0.93
COMMD6-204ENST00000377619 SEPT12Q8IYM1 358 aa9.26□□□□□ -0.93
COMMD6-204ENST00000377619 ZNF837Q96EG3 531 aaPredicted RBP9.26□□□□□ -0.93
COMMD6-204ENST00000377619 ENAMQ9NRM1 1142 aa9.26□□□□□ -0.93
COMMD6-204ENST00000377619 DBN1Q16643 649 aa9.25□□□□□ -0.93
COMMD6-204ENST00000377619 TRIM22Q8IYM9 498 aa9.25□□□□□ -0.93
COMMD6-204ENST00000377619 ATP5J2-PTCD1G3V325 749 aa9.24□□□□□ -0.93
COMMD6-204ENST00000377619 MEN1O00255 615 aa9.24□□□□□ -0.93
COMMD6-204ENST00000377619 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
COMMD6-204ENST00000377619 RIPOR1Q6ZS17 1223 aa9.24□□□□□ -0.93
COMMD6-204ENST00000377619 MBIPQ9NS73 344 aa9.24□□□□□ -0.93
COMMD6-204ENST00000377619 CNTNAP5Q8WYK1 1306 aa9.24□□□□□ -0.93
COMMD6-204ENST00000377619 CC2D2AQ9P2K1 1620 aa9.23□□□□□ -0.93
COMMD6-204ENST00000377619 RFC5P40937 340 aa9.23□□□□□ -0.93
COMMD6-204ENST00000377619 FOXR1Q6PIV2 292 aa9.23□□□□□ -0.93
COMMD6-204ENST00000377619 GMCL1Q96IK5 515 aa9.23□□□□□ -0.93
COMMD6-204ENST00000377619 BIVM-ERCC5R4GMW8 1640 aa9.23□□□□□ -0.93
COMMD6-204ENST00000377619 IGF1RP08069 1367 aa9.23□□□□□ -0.93
COMMD6-204ENST00000377619 TRIM52Q96A61 297 aa9.22□□□□□ -0.93
COMMD6-204ENST00000377619 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
COMMD6-204ENST00000377619 A0A1W2PRU2 124 aa9.21□□□□□ -0.94
COMMD6-204ENST00000377619 POU4F2Q12837 409 aa9.21□□□□□ -0.94
COMMD6-204ENST00000377619 PCDHB9Q9Y5E1 797 aa9.21□□□□□ -0.94
COMMD6-204ENST00000377619 GPC1P35052 558 aa9.2□□□□□ -0.94
COMMD6-204ENST00000377619 GTPBP3Q969Y2 492 aaKnown RBP9.2□□□□□ -0.94
COMMD6-204ENST00000377619 GAS2L1Q99501 681 aaPredicted RBP9.2□□□□□ -0.94
COMMD6-204ENST00000377619 DYRK1BQ9Y463 629 aa9.2□□□□□ -0.94
COMMD6-204ENST00000377619 SYNJ1O43426 1573 aa9.2□□□□□ -0.94
COMMD6-204ENST00000377619 ZBBXA8MT70 800 aa9.19□□□□□ -0.94
COMMD6-204ENST00000377619 PHF20L1A8MW92 1017 aa9.19□□□□□ -0.94
COMMD6-204ENST00000377619 BCRP11274 1271 aa9.19□□□□□ -0.94
COMMD6-204ENST00000377619 BEND7Q8N7W2 519 aaPredicted RBP9.19□□□□□ -0.94
COMMD6-204ENST00000377619 NEDD1Q8NHV4 660 aa9.19□□□□□ -0.94
COMMD6-204ENST00000377619 ACDQ96AP0 544 aa9.19□□□□□ -0.94
COMMD6-204ENST00000377619 DCAF5Q96JK2 942 aa9.19□□□□□ -0.94
COMMD6-204ENST00000377619 TOP2BQ02880 1626 aa9.19□□□□□ -0.94
COMMD6-204ENST00000377619 H7C1W4 665 aa9.18□□□□□ -0.94
COMMD6-204ENST00000377619 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
COMMD6-204ENST00000377619 EEA1Q15075 1411 aa9.18□□□□□ -0.94
COMMD6-204ENST00000377619 PLA2G4EQ3MJ16 856 aa9.18□□□□□ -0.94
COMMD6-204ENST00000377619 SLC27A3Q5K4L6 730 aa9.18□□□□□ -0.94
COMMD6-204ENST00000377619 FBXO45P0C2W1 286 aa9.17□□□□□ -0.94
COMMD6-204ENST00000377619 CC2D2BQ6DHV5 1058 aa9.17□□□□□ -0.94
COMMD6-204ENST00000377619 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
COMMD6-204ENST00000377619 GRIP2Q9C0E4 1043 aa9.17□□□□□ -0.94
COMMD6-204ENST00000377619 MSTNO14793 375 aa9.16□□□□□ -0.94
COMMD6-204ENST00000377619 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
COMMD6-204ENST00000377619 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
COMMD6-204ENST00000377619 TMEM259Q4ZIN3 620 aa9.15□□□□□ -0.94
COMMD6-204ENST00000377619 NBPF10Q6P3W6 841 aaKnown RBP9.15□□□□□ -0.94
COMMD6-204ENST00000377619 PODNQ7Z5L7 613 aa9.15□□□□□ -0.94
COMMD6-204ENST00000377619 NBPF15Q8N660 670 aa9.15□□□□□ -0.94
COMMD6-204ENST00000377619 ITGB2P05107 769 aa9.14□□□□□ -0.95
COMMD6-204ENST00000377619 MX2P20592 715 aa9.14□□□□□ -0.95
COMMD6-204ENST00000377619 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
COMMD6-204ENST00000377619 CCDC125Q86Z20 511 aa9.14□□□□□ -0.95
COMMD6-204ENST00000377619 CFTRP13569 1480 aa9.14□□□□□ -0.95
COMMD6-204ENST00000377619 SCTRP47872 440 aa9.13□□□□□ -0.95
COMMD6-204ENST00000377619 CLN3Q13286 438 aa9.13□□□□□ -0.95
COMMD6-204ENST00000377619 SPOCK3Q9BQ16 436 aa9.13□□□□□ -0.95
COMMD6-204ENST00000377619 TIMMDC1Q9NPL8 285 aa9.13□□□□□ -0.95
COMMD6-204ENST00000377619 KIF21BO75037 1637 aa9.13□□□□□ -0.95
COMMD6-204ENST00000377619 CYP2U1Q7Z449 544 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms