RNA–Protein interactions for RNA: ENST00000376626.5

VSTM1-203, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM1, Length 922 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-203ENST00000376626 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
VSTM1-203ENST00000376626 PARP4Q9UKK3 1724 aaKnown RBP13.1□□□□□ -0.31
VSTM1-203ENST00000376626 DDB1Q16531 1140 aa13.1□□□□□ -0.31
VSTM1-203ENST00000376626 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
VSTM1-203ENST00000376626 IL2RBP14784 551 aa13.09□□□□□ -0.31
VSTM1-203ENST00000376626 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
VSTM1-203ENST00000376626 FAM182BQ5T319 152 aa13.09□□□□□ -0.31
VSTM1-203ENST00000376626 EXOC5O00471 708 aa13.08□□□□□ -0.32
VSTM1-203ENST00000376626 MTHFSP49914 203 aa13.08□□□□□ -0.32
VSTM1-203ENST00000376626 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.32
VSTM1-203ENST00000376626 NBPF4Q96M43 638 aa13.08□□□□□ -0.32
VSTM1-203ENST00000376626 LRRC37A3O60309 1634 aa13.08□□□□□ -0.32
VSTM1-203ENST00000376626 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
VSTM1-203ENST00000376626 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
VSTM1-203ENST00000376626 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
VSTM1-203ENST00000376626 DISP2A7MBM2 1401 aa13.06□□□□□ -0.32
VSTM1-203ENST00000376626 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
VSTM1-203ENST00000376626 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
VSTM1-203ENST00000376626 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
VSTM1-203ENST00000376626 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
VSTM1-203ENST00000376626 FAM196AQ6ZSG2 479 aa13.05□□□□□ -0.32
VSTM1-203ENST00000376626 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
VSTM1-203ENST00000376626 EYA1Q99502 592 aa13.05□□□□□ -0.32
VSTM1-203ENST00000376626 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
VSTM1-203ENST00000376626 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
VSTM1-203ENST00000376626 HOXD11P31277 338 aaPredicted RBP13.04□□□□□ -0.32
VSTM1-203ENST00000376626 OVOS2A0A0G2JMS6 1433 aa13.04□□□□□ -0.32
VSTM1-203ENST00000376626 DIAPH1O60610 1272 aaKnown RBP13.03□□□□□ -0.32
VSTM1-203ENST00000376626 DDX54Q8TDD1 881 aaKnown RBP13.03□□□□□ -0.32
VSTM1-203ENST00000376626 MEGF6O75095 1541 aa13.03□□□□□ -0.32
VSTM1-203ENST00000376626 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
VSTM1-203ENST00000376626 MARCH10Q8NA82 808 aaPredicted RBP13.02□□□□□ -0.33
VSTM1-203ENST00000376626 ZCRB1Q8TBF4 217 aaKnown RBP13.02□□□□□ -0.33
VSTM1-203ENST00000376626 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
VSTM1-203ENST00000376626 TRIM37O94972 964 aa13.01□□□□□ -0.33
VSTM1-203ENST00000376626 ADAMTS8Q9UP79 889 aa13.01□□□□□ -0.33
VSTM1-203ENST00000376626 RGPD1P0DJD0 1748 aa13.01□□□□□ -0.33
VSTM1-203ENST00000376626 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
VSTM1-203ENST00000376626 IL13P35225 146 aa13□□□□□ -0.33
VSTM1-203ENST00000376626 WDR43Q15061 677 aaKnown RBP eCLIP13□□□□□ -0.33
VSTM1-203ENST00000376626 SULT6B1Q6IMI4 303 aa13□□□□□ -0.33
VSTM1-203ENST00000376626 SALL2Q9Y467 1007 aaPredicted RBP13□□□□□ -0.33
VSTM1-203ENST00000376626 KAT6BQ8WYB5 2073 aa13□□□□□ -0.33
VSTM1-203ENST00000376626 RRP1P56182 461 aaKnown RBP12.99□□□□□ -0.33
VSTM1-203ENST00000376626 B4GALNT3Q6L9W6 998 aa12.99□□□□□ -0.33
VSTM1-203ENST00000376626 RCAN3Q9UKA8 241 aa12.99□□□□□ -0.33
VSTM1-203ENST00000376626 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
VSTM1-203ENST00000376626 NCAPD2Q15021 1401 aa12.98□□□□□ -0.33
VSTM1-203ENST00000376626 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
VSTM1-203ENST00000376626 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
VSTM1-203ENST00000376626 BAG6P46379 1132 aa12.98□□□□□ -0.33
VSTM1-203ENST00000376626 AEBP1Q8IUX7 1158 aa12.98□□□□□ -0.33
VSTM1-203ENST00000376626 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
VSTM1-203ENST00000376626 SBF2Q86WG5 1849 aa12.97□□□□□ -0.33
VSTM1-203ENST00000376626 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
VSTM1-203ENST00000376626 HMOX1P09601 288 aa12.97□□□□□ -0.33
VSTM1-203ENST00000376626 ACSBG1Q96GR2 724 aa12.97□□□□□ -0.33
VSTM1-203ENST00000376626 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
VSTM1-203ENST00000376626 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.33
VSTM1-203ENST00000376626 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.33
VSTM1-203ENST00000376626 APBA3O96018 575 aa12.96□□□□□ -0.33
VSTM1-203ENST00000376626 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.33
VSTM1-203ENST00000376626 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.33
VSTM1-203ENST00000376626 RBM19Q9Y4C8 960 aaKnown RBP12.96□□□□□ -0.33
VSTM1-203ENST00000376626 SYTL4Q96C24 671 aaPredicted RBP12.95□□□□□ -0.34
VSTM1-203ENST00000376626 ZNF521Q96K83 1311 aa12.94□□□□□ -0.34
VSTM1-203ENST00000376626 DOT1LQ8TEK3 1739 aa12.94□□□□□ -0.34
VSTM1-203ENST00000376626 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
VSTM1-203ENST00000376626 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
VSTM1-203ENST00000376626 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
VSTM1-203ENST00000376626 BCL11BQ9C0K0 894 aaPredicted RBP12.94□□□□□ -0.34
VSTM1-203ENST00000376626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.34
VSTM1-203ENST00000376626 BCL9O00512 1426 aa12.94□□□□□ -0.34
VSTM1-203ENST00000376626 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
VSTM1-203ENST00000376626 CYP27B1O15528 508 aa12.93□□□□□ -0.34
VSTM1-203ENST00000376626 EN1Q05925 392 aaPredicted RBP12.93□□□□□ -0.34
VSTM1-203ENST00000376626 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
VSTM1-203ENST00000376626 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
VSTM1-203ENST00000376626 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
VSTM1-203ENST00000376626 KDRP35968 1356 aa12.93□□□□□ -0.34
VSTM1-203ENST00000376626 KCNQ2O43526 872 aa12.92□□□□□ -0.34
VSTM1-203ENST00000376626 CCDC136Q96JN2 1154 aa12.92□□□□□ -0.34
VSTM1-203ENST00000376626 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
VSTM1-203ENST00000376626 PTF1AQ7RTS3 328 aa12.91□□□□□ -0.34
VSTM1-203ENST00000376626 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
VSTM1-203ENST00000376626 EP400Q96L91 3159 aa12.91□□□□□ -0.34
VSTM1-203ENST00000376626 NEFMP07197 916 aa12.9□□□□□ -0.34
VSTM1-203ENST00000376626 HSP90AB1P08238 724 aaKnown RBP12.9□□□□□ -0.34
VSTM1-203ENST00000376626 PHKG2P15735 406 aa12.9□□□□□ -0.34
VSTM1-203ENST00000376626 EZH2Q15910 746 aaKnown RBP12.9□□□□□ -0.34
VSTM1-203ENST00000376626 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
VSTM1-203ENST00000376626 BTAF1O14981 1849 aa12.9□□□□□ -0.34
VSTM1-203ENST00000376626 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
VSTM1-203ENST00000376626 PRKAR2BP31323 418 aa12.89□□□□□ -0.35
VSTM1-203ENST00000376626 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
VSTM1-203ENST00000376626 CCDC146Q8IYE0 955 aa12.89□□□□□ -0.35
VSTM1-203ENST00000376626 NGEFQ8N5V2 710 aa12.89□□□□□ -0.35
VSTM1-203ENST00000376626 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
VSTM1-203ENST00000376626 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
VSTM1-203ENST00000376626 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms