RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 RAB15P59190 212 aa13.05□□□□□ -0.32
CFHR3-202ENST00000367427 ZMYND15Q9H091 742 aa13.05□□□□□ -0.32
CFHR3-202ENST00000367427 GAS6Q14393 721 aa13.03□□□□□ -0.32
CFHR3-202ENST00000367427 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
CFHR3-202ENST00000367427 PNMA1Q8ND90 353 aa13.03□□□□□ -0.32
CFHR3-202ENST00000367427 TRIM34Q9BYJ4 488 aa13.03□□□□□ -0.32
CFHR3-202ENST00000367427 ADAMTS2O95450 1211 aa13.02□□□□□ -0.33
CFHR3-202ENST00000367427 RNF144AP50876 292 aaPredicted RBP13.02□□□□□ -0.33
CFHR3-202ENST00000367427 LYPD4Q6UWN0 246 aa13.02□□□□□ -0.33
CFHR3-202ENST00000367427 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.33
CFHR3-202ENST00000367427 RFC5P40937 340 aa13.01□□□□□ -0.33
CFHR3-202ENST00000367427 SRSF11Q05519 484 aaKnown RBP13.01□□□□□ -0.33
CFHR3-202ENST00000367427 ATP1B4Q9UN42 357 aaPredicted RBP12.99□□□□□ -0.33
CFHR3-202ENST00000367427 IRS1P35568 1242 aa12.98□□□□□ -0.33
CFHR3-202ENST00000367427 CYLDQ9NQC7 956 aa12.98□□□□□ -0.33
CFHR3-202ENST00000367427 DNMT3AQ9Y6K1 912 aaPredicted RBP12.97□□□□□ -0.33
CFHR3-202ENST00000367427 PRICKLE2Q7Z3G6 844 aa12.96□□□□□ -0.33
CFHR3-202ENST00000367427 GIGYF1O75420 1035 aaPredicted RBP12.95□□□□□ -0.34
CFHR3-202ENST00000367427 CELA2BP08218 269 aaPredicted RBP12.95□□□□□ -0.34
CFHR3-202ENST00000367427 MARSP56192 900 aaKnown RBP12.94□□□□□ -0.34
CFHR3-202ENST00000367427 KANK3Q6NY19 840 aa12.94□□□□□ -0.34
CFHR3-202ENST00000367427 RHOQP17081 205 aa12.93□□□□□ -0.34
CFHR3-202ENST00000367427 GPC1P35052 558 aa12.93□□□□□ -0.34
CFHR3-202ENST00000367427 TRIM22Q8IYM9 498 aa12.93□□□□□ -0.34
CFHR3-202ENST00000367427 ZNF837Q96EG3 531 aaPredicted RBP12.93□□□□□ -0.34
CFHR3-202ENST00000367427 SCARF2Q96GP6 870 aaPredicted RBP12.93□□□□□ -0.34
CFHR3-202ENST00000367427 GMCL1Q96IK5 515 aa12.93□□□□□ -0.34
CFHR3-202ENST00000367427 GOPCQ9HD26 462 aa12.93□□□□□ -0.34
CFHR3-202ENST00000367427 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
CFHR3-202ENST00000367427 DBN1Q16643 649 aa12.92□□□□□ -0.34
CFHR3-202ENST00000367427 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
CFHR3-202ENST00000367427 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
CFHR3-202ENST00000367427 IGHA1P01876 353 aa12.9□□□□□ -0.34
CFHR3-202ENST00000367427 TMEM259Q4ZIN3 620 aa12.9□□□□□ -0.34
CFHR3-202ENST00000367427 TRIM52Q96A61 297 aa12.9□□□□□ -0.34
CFHR3-202ENST00000367427 A0A1W2PRU2 124 aa12.89□□□□□ -0.35
CFHR3-202ENST00000367427 FBXO45P0C2W1 286 aa12.89□□□□□ -0.35
CFHR3-202ENST00000367427 ERVK-9P63128 1117 aa12.89□□□□□ -0.35
CFHR3-202ENST00000367427 MBIPQ9NS73 344 aa12.89□□□□□ -0.35
CFHR3-202ENST00000367427 GPAT2Q6NUI2 795 aa12.88□□□□□ -0.35
CFHR3-202ENST00000367427 CCDC125Q86Z20 511 aa12.88□□□□□ -0.35
CFHR3-202ENST00000367427 MAP3K10Q02779 954 aa12.87□□□□□ -0.35
CFHR3-202ENST00000367427 GRIP2Q9C0E4 1043 aa12.87□□□□□ -0.35
CFHR3-202ENST00000367427 DYRK1BQ9Y463 629 aa12.87□□□□□ -0.35
CFHR3-202ENST00000367427 PCDHB9Q9Y5E1 797 aa12.87□□□□□ -0.35
CFHR3-202ENST00000367427 FOXK2Q01167 660 aa12.86□□□□□ -0.35
CFHR3-202ENST00000367427 GPR25O00155 361 aa12.85□□□□□ -0.35
CFHR3-202ENST00000367427 MEN1O00255 615 aa12.85□□□□□ -0.35
CFHR3-202ENST00000367427 UBTFP17480 764 aaKnown RBP12.85□□□□□ -0.35
CFHR3-202ENST00000367427 CC2D2BQ6DHV5 1058 aa12.85□□□□□ -0.35
CFHR3-202ENST00000367427 IGF1RP08069 1367 aa12.84□□□□□ -0.35
CFHR3-202ENST00000367427 POU4F2Q12837 409 aa12.84□□□□□ -0.35
CFHR3-202ENST00000367427 ENAMQ9NRM1 1142 aa12.83□□□□□ -0.36
CFHR3-202ENST00000367427 FLIIQ13045 1269 aa12.82□□□□□ -0.36
CFHR3-202ENST00000367427 CLN3Q13286 438 aa12.82□□□□□ -0.36
CFHR3-202ENST00000367427 PCMTD1Q96MG8 357 aaPredicted RBP12.82□□□□□ -0.36
CFHR3-202ENST00000367427 SPATA31C2B4DYI2 1134 aa12.81□□□□□ -0.36
CFHR3-202ENST00000367427 TRAK2O60296 914 aa12.81□□□□□ -0.36
CFHR3-202ENST00000367427 SCTRP47872 440 aa12.81□□□□□ -0.36
CFHR3-202ENST00000367427 RNF20Q5VTR2 975 aa12.81□□□□□ -0.36
CFHR3-202ENST00000367427 FOXR1Q6PIV2 292 aa12.81□□□□□ -0.36
CFHR3-202ENST00000367427 RIPOR1Q6ZS17 1223 aa12.81□□□□□ -0.36
CFHR3-202ENST00000367427 ACDQ96AP0 544 aa12.81□□□□□ -0.36
CFHR3-202ENST00000367427 CNTNAP5Q8WYK1 1306 aa12.81□□□□□ -0.36
CFHR3-202ENST00000367427 H7C1W4 665 aa12.8□□□□□ -0.36
CFHR3-202ENST00000367427 BCRP11274 1271 aa12.8□□□□□ -0.36
CFHR3-202ENST00000367427 WDR44Q5JSH3 913 aa12.8□□□□□ -0.36
CFHR3-202ENST00000367427 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
CFHR3-202ENST00000367427 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
CFHR3-202ENST00000367427 GTPBP3Q969Y2 492 aaKnown RBP12.8□□□□□ -0.36
CFHR3-202ENST00000367427 GPR37L1O60883 481 aa12.79□□□□□ -0.36
CFHR3-202ENST00000367427 MCCD1P59942 119 aaPredicted RBP12.79□□□□□ -0.36
CFHR3-202ENST00000367427 OSBPL3Q9H4L5 887 aa12.79□□□□□ -0.36
CFHR3-202ENST00000367427 ITGB2P05107 769 aa12.78□□□□□ -0.36
CFHR3-202ENST00000367427 NR1H3Q13133 447 aa12.77□□□□□ -0.37
CFHR3-202ENST00000367427 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.37
CFHR3-202ENST00000367427 DCAF5Q96JK2 942 aa12.77□□□□□ -0.37
CFHR3-202ENST00000367427 NLRP3Q96P20 1036 aa12.77□□□□□ -0.37
CFHR3-202ENST00000367427 GAS2L1Q99501 681 aaPredicted RBP12.77□□□□□ -0.37
CFHR3-202ENST00000367427 LRRC4BQ9NT99 713 aa12.77□□□□□ -0.37
CFHR3-202ENST00000367427 CYP2U1Q7Z449 544 aa12.76□□□□□ -0.37
CFHR3-202ENST00000367427 ARID3AQ99856 593 aa12.76□□□□□ -0.37
CFHR3-202ENST00000367427 PLA2G4EQ3MJ16 856 aa12.75□□□□□ -0.37
CFHR3-202ENST00000367427 BEND7Q8N7W2 519 aaPredicted RBP12.75□□□□□ -0.37
CFHR3-202ENST00000367427 PODXL2Q9NZ53 605 aa12.75□□□□□ -0.37
CFHR3-202ENST00000367427 PHF20L1A8MW92 1017 aa12.74□□□□□ -0.37
CFHR3-202ENST00000367427 THBS1P07996 1170 aa12.74□□□□□ -0.37
CFHR3-202ENST00000367427 F11P03951 625 aa12.73□□□□□ -0.37
CFHR3-202ENST00000367427 TRERF1Q96PN7 1200 aa12.73□□□□□ -0.37
CFHR3-202ENST00000367427 SOCS7O14512 581 aa12.72□□□□□ -0.37
CFHR3-202ENST00000367427 ARHGEF10LQ9HCE6 1279 aa12.72□□□□□ -0.37
CFHR3-202ENST00000367427 TIMMDC1Q9NPL8 285 aa12.72□□□□□ -0.37
CFHR3-202ENST00000367427 PCDHB11Q9Y5F2 797 aa12.72□□□□□ -0.37
CFHR3-202ENST00000367427 HRH3Q9Y5N1 445 aa12.72□□□□□ -0.37
CFHR3-202ENST00000367427 WASLO00401 505 aaPredicted RBP12.71□□□□□ -0.37
CFHR3-202ENST00000367427 MX2P20592 715 aa12.71□□□□□ -0.37
CFHR3-202ENST00000367427 TAS1R3Q7RTX0 852 aa12.71□□□□□ -0.37
CFHR3-202ENST00000367427 C1orf115Q9H7X2 142 aa12.71□□□□□ -0.37
CFHR3-202ENST00000367427 NEDD1Q8NHV4 660 aa12.7□□□□□ -0.38
CFHR3-202ENST00000367427 NUCKS1Q9H1E3 243 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms