RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 AEBP2Q6ZN18 517 aaPredicted RBP40.03■■■■■ 4
CFHR3-202ENST00000367427 CHIC1Q5VXU3 224 aa37.91■■■■□ 3.66
CFHR3-202ENST00000367427 SENP3Q9H4L4 574 aaPredicted RBP34.06■■■■□ 3.04
CFHR3-202ENST00000367427 PHF23Q9BUL5 403 aaPredicted RBP33.65■■■□□ 2.98
CFHR3-202ENST00000367427 FOXD1Q16676 465 aa31.81■■■□□ 2.68
CFHR3-202ENST00000367427 PLPPR3Q6T4P5 718 aa30.2■■■□□ 2.43
CFHR3-202ENST00000367427 PPP6R1Q9UPN7 881 aa29.74■■■□□ 2.35
CFHR3-202ENST00000367427 MSH5O43196 834 aa29.73■■■□□ 2.35
CFHR3-202ENST00000367427 PIAS4Q8N2W9 510 aaPredicted RBP29.62■■■□□ 2.33
CFHR3-202ENST00000367427 ADRA2BP18089 450 aa29.58■■■□□ 2.33
CFHR3-202ENST00000367427 POTEDQ86YR6 584 aa29.19■■■□□ 2.26
CFHR3-202ENST00000367427 MAPK8IP2Q13387 824 aaPredicted RBP27.21■■□□□ 1.95
CFHR3-202ENST00000367427 DMRT2Q9Y5R5 561 aa27.05■■□□□ 1.92
CFHR3-202ENST00000367427 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
CFHR3-202ENST00000367427 PPP4R3CPQ6ZMV5 832 aa26.49■■□□□ 1.83
CFHR3-202ENST00000367427 HOXD11P31277 338 aaPredicted RBP26.05■■□□□ 1.76
CFHR3-202ENST00000367427 CNKSR2Q8WXI2 1034 aa26■■□□□ 1.75
CFHR3-202ENST00000367427 RNF216Q9NWF9 866 aaPredicted RBP25.8■■□□□ 1.72
CFHR3-202ENST00000367427 DCAF8L1A6NGE4 600 aa25.78■■□□□ 1.72
CFHR3-202ENST00000367427 CACNB1Q02641 598 aaPredicted RBP25.52■■□□□ 1.68
CFHR3-202ENST00000367427 RNF39Q9H2S5 420 aa25.42■■□□□ 1.66
CFHR3-202ENST00000367427 NCBP3Q53F19 620 aaKnown RBP25.38■■□□□ 1.65
CFHR3-202ENST00000367427 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
CFHR3-202ENST00000367427 NPM3O75607 178 aaKnown RBP25.1■■□□□ 1.61
CFHR3-202ENST00000367427 C1QBPQ07021 282 aaKnown RBP25.02■■□□□ 1.6
CFHR3-202ENST00000367427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.7■■□□□ 1.54
CFHR3-202ENST00000367427 KCNA4P22459 653 aa24.55■■□□□ 1.52
CFHR3-202ENST00000367427 U3KPZ7 1027 aaPredicted RBP24.25■■□□□ 1.47
CFHR3-202ENST00000367427 SLC4A2P04920 1241 aa24.04■■□□□ 1.44
CFHR3-202ENST00000367427 SPINK5Q9NQ38 1064 aaPredicted RBP23.92■■□□□ 1.42
CFHR3-202ENST00000367427 CAPN15O75808 1086 aa23.79■■□□□ 1.4
CFHR3-202ENST00000367427 DSG3P32926 999 aa23.78■■□□□ 1.4
CFHR3-202ENST00000367427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
CFHR3-202ENST00000367427 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
CFHR3-202ENST00000367427 APLP2Q06481 763 aa23.45■■□□□ 1.34
CFHR3-202ENST00000367427 TRHP20396 242 aaPredicted RBP23.4■■□□□ 1.34
CFHR3-202ENST00000367427 ZNF219Q9P2Y4 722 aaPredicted RBP23.37■■□□□ 1.33
CFHR3-202ENST00000367427 SAMD1Q6SPF0 538 aaPredicted RBP23.34■■□□□ 1.33
CFHR3-202ENST00000367427 ABCB7O75027 752 aa23.25■■□□□ 1.31
CFHR3-202ENST00000367427 MYCNP04198 464 aaPredicted RBP23.17■■□□□ 1.3
CFHR3-202ENST00000367427 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
CFHR3-202ENST00000367427 FOXD4L1Q9NU39 408 aa22.89■■□□□ 1.25
CFHR3-202ENST00000367427 POTEHQ6S545 545 aa22.83■■□□□ 1.25
CFHR3-202ENST00000367427 POLA2Q14181 598 aa22.81■■□□□ 1.24
CFHR3-202ENST00000367427 ATF5Q9Y2D1 282 aaPredicted RBP22.72■■□□□ 1.23
CFHR3-202ENST00000367427 ZBTB22O15209 634 aa22.62■■□□□ 1.21
CFHR3-202ENST00000367427 RBM42Q9BTD8 480 aaKnown RBP22.6■■□□□ 1.21
CFHR3-202ENST00000367427 ZBTB12Q9Y330 459 aaPredicted RBP22.29■■□□□ 1.16
CFHR3-202ENST00000367427 ATXN8OSP0DMR3 200 aa22.24■■□□□ 1.15
CFHR3-202ENST00000367427 CHRDL2Q6WN34 429 aa22.17■■□□□ 1.14
CFHR3-202ENST00000367427 AKT1S1Q96B36 256 aa22.12■■□□□ 1.13
CFHR3-202ENST00000367427 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
CFHR3-202ENST00000367427 REM2Q8IYK8 340 aaPredicted RBP21.92■■□□□ 1.1
CFHR3-202ENST00000367427 FBLN2P98095 1184 aa21.7■■□□□ 1.06
CFHR3-202ENST00000367427 PITPNM1O00562 1244 aa21.68■■□□□ 1.06
CFHR3-202ENST00000367427 MKRN4PQ13434 485 aaPredicted RBP21.68■■□□□ 1.06
CFHR3-202ENST00000367427 PIP4P2Q8N4L2 257 aa21.66■■□□□ 1.06
CFHR3-202ENST00000367427 SPDYE2BA6NHP3 402 aa21.64■■□□□ 1.05
CFHR3-202ENST00000367427 SPDYE6P0CI01 402 aa21.64■■□□□ 1.05
CFHR3-202ENST00000367427 SPDYE2Q495Y8 402 aa21.64■■□□□ 1.05
CFHR3-202ENST00000367427 FXR2P51116 673 aaKnown RBP eCLIP21.56■■□□□ 1.04
CFHR3-202ENST00000367427 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
CFHR3-202ENST00000367427 SSUH2Q9Y2M2 353 aa21.4■■□□□ 1.02
CFHR3-202ENST00000367427 SP7Q8TDD2 431 aaPredicted RBP21.37■■□□□ 1.01
CFHR3-202ENST00000367427 ZNF692Q9BU19 519 aaPredicted RBP21.35■■□□□ 1.01
CFHR3-202ENST00000367427 SPDYE1Q8NFV5 336 aaPredicted RBP21.26■□□□□ 0.99
CFHR3-202ENST00000367427 HAX1O00165 279 aa21.21■□□□□ 0.99
CFHR3-202ENST00000367427 CLEC11AQ9Y240 323 aa21.18■□□□□ 0.98
CFHR3-202ENST00000367427 PRKAR2AP13861 404 aaKnown RBP21.09■□□□□ 0.97
CFHR3-202ENST00000367427 EVX2Q03828 476 aa21.07■□□□□ 0.96
CFHR3-202ENST00000367427 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
CFHR3-202ENST00000367427 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
CFHR3-202ENST00000367427 C19orf67A6NJJ6 358 aa20.86■□□□□ 0.93
CFHR3-202ENST00000367427 PRR29P0C7W0 189 aa20.85■□□□□ 0.93
CFHR3-202ENST00000367427 CHADLQ6NUI6 762 aa20.84■□□□□ 0.93
CFHR3-202ENST00000367427 FARP1Q9Y4F1 1045 aaPredicted RBP20.55■□□□□ 0.88
CFHR3-202ENST00000367427 GABBR2O75899 941 aa20.54■□□□□ 0.88
CFHR3-202ENST00000367427 SPDYE4A6NLX3 237 aa20.53■□□□□ 0.88
CFHR3-202ENST00000367427 STAG3Q9UJ98 1225 aa20.44■□□□□ 0.86
CFHR3-202ENST00000367427 CREBZFQ9NS37 354 aa20.41■□□□□ 0.86
CFHR3-202ENST00000367427 CD44P16070 742 aaKnown RBP20.4■□□□□ 0.86
CFHR3-202ENST00000367427 CLCN6P51797 869 aa20.19■□□□□ 0.82
CFHR3-202ENST00000367427 POTEIP0CG38 1075 aa20.17■□□□□ 0.82
CFHR3-202ENST00000367427 PROM2Q8N271 834 aa20.15■□□□□ 0.82
CFHR3-202ENST00000367427 ZNF579Q8NAF0 562 aaKnown RBP20.14■□□□□ 0.81
CFHR3-202ENST00000367427 MNX1P50219 401 aaPredicted RBP20.1■□□□□ 0.81
CFHR3-202ENST00000367427 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
CFHR3-202ENST00000367427 LHX8Q68G74 356 aa20.04■□□□□ 0.8
CFHR3-202ENST00000367427 NPM1P06748 294 aaKnown RBP eCLIP19.94■□□□□ 0.78
CFHR3-202ENST00000367427 GALR2O43603 387 aaPredicted RBP19.89■□□□□ 0.77
CFHR3-202ENST00000367427 DCBLD2Q96PD2 775 aa19.88■□□□□ 0.77
CFHR3-202ENST00000367427 PAK3O75914 559 aaPredicted RBP19.85■□□□□ 0.77
CFHR3-202ENST00000367427 PHF12Q96QT6 1004 aa19.84■□□□□ 0.77
CFHR3-202ENST00000367427 MS4A3Q96HJ5 214 aa19.58■□□□□ 0.72
CFHR3-202ENST00000367427 TSPYL2Q9H2G4 693 aaPredicted RBP19.58■□□□□ 0.72
CFHR3-202ENST00000367427 CCDC61Q9Y6R9 512 aa19.57■□□□□ 0.72
CFHR3-202ENST00000367427 PELP1Q8IZL8 1130 aaKnown RBP19.56■□□□□ 0.72
CFHR3-202ENST00000367427 MIER1Q8N108 512 aa19.56■□□□□ 0.72
CFHR3-202ENST00000367427 POTEB2H3BUK9 544 aa19.51■□□□□ 0.71
CFHR3-202ENST00000367427 ASTLQ6HA08 431 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms