RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SMC1AQ14683 1233 aaKnown RBP15.41■□□□□ 0.06
SRGAP3-201ENST00000360413 FGFR1OPO95684 399 aaKnown RBP15.41■□□□□ 0.06
SRGAP3-201ENST00000360413 CCDC158Q5M9N0 1113 aa15.41■□□□□ 0.06
SRGAP3-201ENST00000360413 FYB1O15117 783 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 GPRASP1Q5JY77 1395 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 LARP1BQ659C4 914 aaKnown RBP15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 CCDC30Q5VVM6 783 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 LRRC45Q96CN5 670 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 CEP131Q9UPN4 1083 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 TAOK3Q9H2K8 898 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 SREK1Q8WXA9 508 aaKnown RBP15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 PHF23Q9BUL5 403 aaPredicted RBP15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 CYP46A1Q9Y6A2 500 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 GCOM1H8Y6P7 765 aaPredicted RBP15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 MYZAPP0CAP1 466 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 STK3Q13188 491 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 RAI14Q9P0K7 980 aa15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 V9GYY5 206 aaPredicted RBP15.4■□□□□ 0.06
SRGAP3-201ENST00000360413 PABPN1LA6NDY0 278 aaKnown RBP15.39■□□□□ 0.05
SRGAP3-201ENST00000360413 TSPYL4Q9UJ04 414 aa15.39■□□□□ 0.05
SRGAP3-201ENST00000360413 DHX57Q6P158 1386 aaKnown RBP15.39■□□□□ 0.05
SRGAP3-201ENST00000360413 UBE4AQ14139 1066 aa15.39■□□□□ 0.05
SRGAP3-201ENST00000360413 GOPCQ9HD26 462 aa15.39■□□□□ 0.05
SRGAP3-201ENST00000360413 DDX23Q9BUQ8 820 aaKnown RBP15.39■□□□□ 0.05
SRGAP3-201ENST00000360413 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
SRGAP3-201ENST00000360413 HOMER2Q9NSB8 354 aa15.39■□□□□ 0.05
SRGAP3-201ENST00000360413 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
SRGAP3-201ENST00000360413 IVLP07476 585 aa15.38■□□□□ 0.05
SRGAP3-201ENST00000360413 MTMR7Q9Y216 660 aa15.38■□□□□ 0.05
SRGAP3-201ENST00000360413 TDO2P48775 406 aa15.38■□□□□ 0.05
SRGAP3-201ENST00000360413 BMS1Q14692 1282 aaKnown RBP15.38■□□□□ 0.05
SRGAP3-201ENST00000360413 KRT222Q8N1A0 295 aa15.38■□□□□ 0.05
SRGAP3-201ENST00000360413 HOOK3Q86VS8 718 aa15.38■□□□□ 0.05
SRGAP3-201ENST00000360413 KIF4BQ2VIQ3 1234 aa15.38■□□□□ 0.05
SRGAP3-201ENST00000360413 CAMK4Q16566 473 aa15.38■□□□□ 0.05
SRGAP3-201ENST00000360413 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 SPECC1LQ69YQ0 1117 aa15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 AKNAQ7Z591 1439 aa15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 MATR3P43243 847 aaKnown RBP eCLIP15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 TMEM87AQ8NBN3 555 aa15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 TRAK1Q9UPV9 953 aa15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 EIF5P55010 431 aaKnown RBP15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 DAAM2Q86T65 1068 aa15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 GAS2L2Q8NHY3 880 aa15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 CLIP2Q9UDT6 1046 aa15.37■□□□□ 0.05
SRGAP3-201ENST00000360413 HSPA4P34932 840 aa15.36■□□□□ 0.05
SRGAP3-201ENST00000360413 SRCIN1Q9C0H9 1055 aa15.36■□□□□ 0.05
SRGAP3-201ENST00000360413 CCDC69A6NI79 296 aa15.36■□□□□ 0.05
SRGAP3-201ENST00000360413 SOGA1O94964 1423 aa15.36■□□□□ 0.05
SRGAP3-201ENST00000360413 FERP16591 822 aa15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 TTC31Q49AM3 519 aaPredicted RBP15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 CCDC183Q5T5S1 534 aa15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 MCM5P33992 734 aa15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 SPA17Q15506 151 aa15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 PRIMPOLQ96LW4 560 aa15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 GTPBP4Q9BZE4 634 aaKnown RBP15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 TRMT1Q9NXH9 659 aaKnown RBP15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 CPSF2Q9P2I0 782 aaKnown RBP15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 CTNNA3Q9UI47 895 aa15.35■□□□□ 0.05
SRGAP3-201ENST00000360413 GCC1Q96CN9 775 aa15.34■□□□□ 0.05
SRGAP3-201ENST00000360413 KIF20AO95235 890 aa15.34■□□□□ 0.05
SRGAP3-201ENST00000360413 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
SRGAP3-201ENST00000360413 SEPT6Q14141 434 aa15.34■□□□□ 0.05
SRGAP3-201ENST00000360413 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
SRGAP3-201ENST00000360413 DRC1Q96MC2 740 aa15.34■□□□□ 0.05
SRGAP3-201ENST00000360413 SSX2IPQ9Y2D8 614 aa15.34■□□□□ 0.05
SRGAP3-201ENST00000360413 ZHX3Q9H4I2 956 aa15.34■□□□□ 0.05
SRGAP3-201ENST00000360413 KRT32Q14532 448 aa15.34■□□□□ 0.05
SRGAP3-201ENST00000360413 CCDC178Q5BJE1 867 aa15.33■□□□□ 0.05
SRGAP3-201ENST00000360413 SPECC1Q5M775 1068 aa15.33■□□□□ 0.05
SRGAP3-201ENST00000360413 CCDC160A6NGH7 325 aa15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 SSR1P43307 286 aaKnown RBP15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 SRRTQ9BXP5 876 aaKnown RBP15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 CETN1Q12798 172 aa15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 C6orf163Q5TEZ5 329 aa15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 TMOD2Q9NZR1 351 aa15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 RSPH14Q9UHP6 348 aa15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 PPM1FP49593 454 aaPredicted RBP15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 EHMT1Q9H9B1 1298 aa15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 PAXBP1Q9Y5B6 917 aa15.33■□□□□ 0.04
SRGAP3-201ENST00000360413 TTC39AQ5SRH9 613 aa15.32■□□□□ 0.04
SRGAP3-201ENST00000360413 TMX1Q9H3N1 280 aa15.32■□□□□ 0.04
SRGAP3-201ENST00000360413 WDR66Q8TBY9 1149 aa15.32■□□□□ 0.04
SRGAP3-201ENST00000360413 MPHOSPH6Q99547 160 aaKnown RBP15.32■□□□□ 0.04
SRGAP3-201ENST00000360413 GSTTP1A0A1W2PQM5 241 aa15.32■□□□□ 0.04
SRGAP3-201ENST00000360413 NUTM2FA1L443 756 aa15.32■□□□□ 0.04
SRGAP3-201ENST00000360413 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
SRGAP3-201ENST00000360413 CNNM1Q9NRU3 951 aa15.32■□□□□ 0.04
SRGAP3-201ENST00000360413 TOP1P11387 765 aaKnown RBP15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 ZNF76P36508 570 aa15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 MICALL1Q8N3F8 863 aa15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 CEP135Q66GS9 1140 aa15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 FYCO1Q9BQS8 1478 aa15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 CCDC83Q8IWF9 413 aa15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 SEC63Q9UGP8 760 aaKnown RBP15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 MSL1Q68DK7 614 aa15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms