RNA–Protein interactions for RNA: ENST00000356100.6

PTPRT-201, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-201ENST00000356100 ME1P48163 572 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 ZFYVE27Q5T4F4 411 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 ZNF530Q6P9A1 599 aaPredicted RBP7.08□□□□□ -1.28
PTPRT-201ENST00000356100 PRAM1Q96QH2 718 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 RPAP2Q8IXW5 612 aaPredicted RBP7.08□□□□□ -1.28
PTPRT-201ENST00000356100 NECTIN2Q92692 538 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 PYM1Q9BRP8 204 aaKnown RBP7.08□□□□□ -1.28
PTPRT-201ENST00000356100 ADGRL1O94910 1474 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 SLF2Q8IX21 1173 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 DEF6Q9H4E7 631 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 TTC21BQ7Z4L5 1316 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 RAB34Q9BZG1 259 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 VPS36Q86VN1 386 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 GBP2P32456 591 aaPredicted RBP7.08□□□□□ -1.28
PTPRT-201ENST00000356100 USP8P40818 1118 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 SLC4A2P04920 1241 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 AMOTQ4VCS5 1084 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 CABP4P57796 275 aa7.08□□□□□ -1.28
PTPRT-201ENST00000356100 DNAJC2Q99543 621 aaKnown RBP7.08□□□□□ -1.28
PTPRT-201ENST00000356100 SCAND2PQ9GZW5 306 aaPredicted RBP7.08□□□□□ -1.28
PTPRT-201ENST00000356100 SERPINC1P01008 464 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 IGHMBP2P38935 993 aaKnown RBP7.07□□□□□ -1.28
PTPRT-201ENST00000356100 WDR97A6NE52 1622 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 KIF20AO95235 890 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 IMMTQ16891 758 aaKnown RBP7.07□□□□□ -1.28
PTPRT-201ENST00000356100 HSP90AB3PQ58FF7 597 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 JAKMIP3Q5VZ66 844 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 CCDC112Q8NEF3 446 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 SEC63Q9UGP8 760 aaKnown RBP7.07□□□□□ -1.28
PTPRT-201ENST00000356100 ZNF644Q9H582 1327 aaPredicted RBP7.07□□□□□ -1.28
PTPRT-201ENST00000356100 TRAK2O60296 914 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 PDCL2Q8N4E4 241 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 KIAA0754O94854 1291 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 FIBPO43427 364 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 ZNF397Q8NF99 534 aaPredicted RBP7.07□□□□□ -1.28
PTPRT-201ENST00000356100 NSD3Q9BZ95 1437 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 FGFR1OPO95684 399 aaKnown RBP7.07□□□□□ -1.28
PTPRT-201ENST00000356100 CDK19Q9BWU1 502 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 SF3B2Q13435 895 aaKnown RBP7.07□□□□□ -1.28
PTPRT-201ENST00000356100 RAPGEF6Q8TEU7 1601 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 STARD3NLO95772 234 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 BLOC1S2Q6QNY1 142 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 PROSER2Q86WR7 435 aaPredicted RBP7.07□□□□□ -1.28
PTPRT-201ENST00000356100 SPATA32Q96LK8 384 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 TMOD2Q9NZR1 351 aa7.07□□□□□ -1.28
PTPRT-201ENST00000356100 NOB1Q9ULX3 412 aaKnown RBP7.07□□□□□ -1.28
PTPRT-201ENST00000356100 SEPT7Q16181 437 aaKnown RBP7.06□□□□□ -1.28
PTPRT-201ENST00000356100 CTAGE5O15320 804 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 CCDC181Q5TID7 509 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 GRIN2AQ12879 1464 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 CETN2P41208 172 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 MAP9Q49MG5 647 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 FYB1O15117 783 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 GBP3Q9H0R5 595 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 SCAF11Q99590 1463 aaKnown RBP7.06□□□□□ -1.28
PTPRT-201ENST00000356100 AACSQ86V21 672 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 CFAP43Q8NDM7 1665 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 PATL2C9JE40 543 aaKnown RBP7.06□□□□□ -1.28
PTPRT-201ENST00000356100 WDHD1O75717 1129 aaPredicted RBP7.06□□□□□ -1.28
PTPRT-201ENST00000356100 CHD1LQ86WJ1 897 aa7.06□□□□□ -1.28
PTPRT-201ENST00000356100 PPP4R3BQ5MIZ7 849 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 CCDC12Q8WUD4 166 aaPredicted RBP7.05□□□□□ -1.28
PTPRT-201ENST00000356100 GNAT3A8MTJ3 354 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 LARP1BQ659C4 914 aaKnown RBP7.05□□□□□ -1.28
PTPRT-201ENST00000356100 CEP126Q9P2H0 1117 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 NAIPQ13075 1403 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 AIDAQ96BJ3 306 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 FMNL2Q96PY5 1086 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 RNF41Q9H4P4 317 aaPredicted RBP7.05□□□□□ -1.28
PTPRT-201ENST00000356100 PRDM11Q9NQV5 511 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 AXDND1Q5T1B0 1012 aaPredicted RBP7.05□□□□□ -1.28
PTPRT-201ENST00000356100 PTPRCP08575 1304 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 BTBD11A6QL63 1104 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 PPP4R3AQ6IN85 833 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 FEZ1Q99689 392 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 EHMT1Q9H9B1 1298 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 TEX14Q8IWB6 1497 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 CFAP70Q5T0N1 1121 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 NUP160Q12769 1436 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 NEMFO60524 1076 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 GLRX3O76003 335 aaKnown RBP7.05□□□□□ -1.28
PTPRT-201ENST00000356100 CCDC61Q9Y6R9 512 aa7.05□□□□□ -1.28
PTPRT-201ENST00000356100 NFE2L2Q16236 605 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 TOM1L2Q6ZVM7 507 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 PAF1Q8N7H5 531 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 PDRG1Q9NUG6 133 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 PDZRN3Q9UPQ7 1066 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 TDO2P48775 406 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 PDCL3Q9H2J4 239 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 EXOSC9Q06265 439 aaKnown RBP7.04□□□□□ -1.28
PTPRT-201ENST00000356100 KIF1BPQ96EK5 621 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 SRGAP3O43295 1099 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 ZSCAN12O43309 604 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 UPF3BQ9BZI7 483 aaKnown RBP7.04□□□□□ -1.28
PTPRT-201ENST00000356100 ARHGEF11O15085 1522 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 CDK13Q14004 1512 aaKnown RBP7.04□□□□□ -1.28
PTPRT-201ENST00000356100 SULT6B1Q6IMI4 303 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 AFAP1Q8N556 730 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 NUP62CLQ9H1M0 184 aa7.04□□□□□ -1.28
PTPRT-201ENST00000356100 DDX12PQ92771 950 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms