RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 GPT2Q8TD30 523 aa11.69□□□□□ -0.54
DDX53-201ENST00000327968 UPF3BQ9BZI7 483 aaKnown RBP11.69□□□□□ -0.54
DDX53-201ENST00000327968 ISY1Q9ULR0 285 aaKnown RBP11.69□□□□□ -0.54
DDX53-201ENST00000327968 PRKAR2BP31323 418 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 SNX21Q969T3 373 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 RILPL2Q969X0 211 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 USP25Q9UHP3 1055 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 TULP4Q9NRJ4 1543 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 ABCC11Q96J66 1382 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 LMBRD1Q9NUN5 540 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 XRN1Q8IZH2 1706 aaKnown RBP11.68□□□□□ -0.54
DDX53-201ENST00000327968 TRIM6-TRIM34B2RNG4 842 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 ST18O60284 1047 aa11.68□□□□□ -0.54
DDX53-201ENST00000327968 NUCB2P80303 420 aa11.67□□□□□ -0.54
DDX53-201ENST00000327968 KIAA2012Q0VF49 1180 aa11.67□□□□□ -0.54
DDX53-201ENST00000327968 BMP2KLQ5H9B9 411 aa11.67□□□□□ -0.54
DDX53-201ENST00000327968 MLECQ14165 292 aa11.67□□□□□ -0.54
DDX53-201ENST00000327968 NECTIN2Q92692 538 aa11.67□□□□□ -0.54
DDX53-201ENST00000327968 PPP1R9BQ96SB3 815 aa11.67□□□□□ -0.54
DDX53-201ENST00000327968 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
DDX53-201ENST00000327968 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
DDX53-201ENST00000327968 FAM83GA6ND36 823 aa11.67□□□□□ -0.54
DDX53-201ENST00000327968 ZKSCAN5Q9Y2L8 839 aa11.67□□□□□ -0.54
DDX53-201ENST00000327968 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
DDX53-201ENST00000327968 NGEFQ8N5V2 710 aa11.66□□□□□ -0.54
DDX53-201ENST00000327968 ADAMTS13Q76LX8 1427 aa11.66□□□□□ -0.54
DDX53-201ENST00000327968 GSPT1P15170 499 aaKnown RBP11.66□□□□□ -0.54
DDX53-201ENST00000327968 PTMSP20962 102 aa11.66□□□□□ -0.54
DDX53-201ENST00000327968 CASC1Q6TDU7 716 aa11.66□□□□□ -0.54
DDX53-201ENST00000327968 NOL7Q9UMY1 257 aaKnown RBP11.66□□□□□ -0.54
DDX53-201ENST00000327968 AAMPQ13685 434 aa11.65□□□□□ -0.54
DDX53-201ENST00000327968 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.65□□□□□ -0.54
DDX53-201ENST00000327968 PIK3R4Q99570 1358 aa11.65□□□□□ -0.54
DDX53-201ENST00000327968 DIAPH1O60610 1272 aaKnown RBP11.65□□□□□ -0.54
DDX53-201ENST00000327968 ANO2Q9NQ90 1003 aa11.65□□□□□ -0.54
DDX53-201ENST00000327968 PPP4R3BQ5MIZ7 849 aa11.65□□□□□ -0.55
DDX53-201ENST00000327968 ZNF428Q96B54 188 aa11.65□□□□□ -0.55
DDX53-201ENST00000327968 CCDC39Q9UFE4 941 aa11.65□□□□□ -0.55
DDX53-201ENST00000327968 MAP4K4O95819 1239 aaPredicted RBP11.64□□□□□ -0.55
DDX53-201ENST00000327968 RABEP1Q15276 862 aa11.64□□□□□ -0.55
DDX53-201ENST00000327968 DDX54Q8TDD1 881 aaKnown RBP11.64□□□□□ -0.55
DDX53-201ENST00000327968 PTCH1Q13635 1447 aa11.64□□□□□ -0.55
DDX53-201ENST00000327968 POLR3AO14802 1390 aaPredicted RBP11.64□□□□□ -0.55
DDX53-201ENST00000327968 DDIT3P35638 169 aa11.64□□□□□ -0.55
DDX53-201ENST00000327968 SIRT2Q8IXJ6 389 aa11.64□□□□□ -0.55
DDX53-201ENST00000327968 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
DDX53-201ENST00000327968 GADD45BO75293 160 aaPredicted RBP11.63□□□□□ -0.55
DDX53-201ENST00000327968 SASS6Q6UVJ0 657 aa11.63□□□□□ -0.55
DDX53-201ENST00000327968 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
DDX53-201ENST00000327968 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
DDX53-201ENST00000327968 TSPY26PQ9H489 355 aa11.63□□□□□ -0.55
DDX53-201ENST00000327968 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
DDX53-201ENST00000327968 PRDM4Q9UKN5 801 aa11.63□□□□□ -0.55
DDX53-201ENST00000327968 TOPAZ1Q8N9V7 1692 aa11.62□□□□□ -0.55
DDX53-201ENST00000327968 FIBPO43427 364 aa11.62□□□□□ -0.55
DDX53-201ENST00000327968 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
DDX53-201ENST00000327968 ZBTB7BO15156 539 aaPredicted RBP11.62□□□□□ -0.55
DDX53-201ENST00000327968 HCLS1P14317 486 aaPredicted RBP11.62□□□□□ -0.55
DDX53-201ENST00000327968 SDSP20132 328 aa11.62□□□□□ -0.55
DDX53-201ENST00000327968 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
DDX53-201ENST00000327968 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
DDX53-201ENST00000327968 TWISTNBQ3B726 338 aaPredicted RBP11.62□□□□□ -0.55
DDX53-201ENST00000327968 INTS3Q68E01 1043 aaKnown RBP11.62□□□□□ -0.55
DDX53-201ENST00000327968 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
DDX53-201ENST00000327968 NWD1Q149M9 1564 aa11.61□□□□□ -0.55
DDX53-201ENST00000327968 LRSAM1Q6UWE0 723 aa11.61□□□□□ -0.55
DDX53-201ENST00000327968 PLEKHM2Q8IWE5 1019 aa11.61□□□□□ -0.55
DDX53-201ENST00000327968 DRC7Q8IY82 874 aa11.61□□□□□ -0.55
DDX53-201ENST00000327968 ZNF592Q92610 1267 aa11.61□□□□□ -0.55
DDX53-201ENST00000327968 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
DDX53-201ENST00000327968 EXOC6BQ9Y2D4 811 aa11.61□□□□□ -0.55
DDX53-201ENST00000327968 NPHP1O15259 732 aa11.61□□□□□ -0.55
DDX53-201ENST00000327968 THEMISQ8N1K5 641 aaPredicted RBP11.61□□□□□ -0.55
DDX53-201ENST00000327968 C8orf58Q8NAV2 365 aa11.6□□□□□ -0.55
DDX53-201ENST00000327968 MAP7D2Q96T17 732 aa11.6□□□□□ -0.55
DDX53-201ENST00000327968 CHD2O14647 1828 aaKnown RBP11.6□□□□□ -0.55
DDX53-201ENST00000327968 ZNF445P59923 1031 aa11.6□□□□□ -0.55
DDX53-201ENST00000327968 ZNF771Q7L3S4 317 aaPredicted RBP11.6□□□□□ -0.55
DDX53-201ENST00000327968 USP26Q9BXU7 913 aa11.6□□□□□ -0.55
DDX53-201ENST00000327968 ZDHHC9Q9Y397 364 aa11.6□□□□□ -0.55
DDX53-201ENST00000327968 DYNC1I1O14576 645 aa11.59□□□□□ -0.55
DDX53-201ENST00000327968 EVC2Q86UK5 1308 aa11.59□□□□□ -0.55
DDX53-201ENST00000327968 F6X3S4 739 aa11.59□□□□□ -0.55
DDX53-201ENST00000327968 TMX3Q96JJ7 454 aa11.59□□□□□ -0.55
DDX53-201ENST00000327968 PPIP5K1Q6PFW1 1433 aa11.59□□□□□ -0.55
DDX53-201ENST00000327968 ADCY5O95622 1261 aa11.59□□□□□ -0.55
DDX53-201ENST00000327968 U2AF2P26368 475 aaKnown RBP eCLIP11.58□□□□□ -0.56
DDX53-201ENST00000327968 TBX22Q9Y458 520 aa11.58□□□□□ -0.56
DDX53-201ENST00000327968 AKAP12Q02952 1782 aa11.58□□□□□ -0.56
DDX53-201ENST00000327968 TRERF1Q96PN7 1200 aa11.58□□□□□ -0.56
DDX53-201ENST00000327968 ATP7BP35670 1465 aa11.58□□□□□ -0.56
DDX53-201ENST00000327968 NOLC1Q14978 699 aaKnown RBP eCLIP11.58□□□□□ -0.56
DDX53-201ENST00000327968 TTC22Q5TAA0 569 aa11.58□□□□□ -0.56
DDX53-201ENST00000327968 GIMAP6Q6P9H5 292 aa11.58□□□□□ -0.56
DDX53-201ENST00000327968 NSD2O96028 1365 aa11.57□□□□□ -0.56
DDX53-201ENST00000327968 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
DDX53-201ENST00000327968 VGLL3A8MV65 326 aa11.57□□□□□ -0.56
DDX53-201ENST00000327968 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
DDX53-201ENST00000327968 MBIPQ9NS73 344 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms