RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 PRDM10Q9NQV6 1147 aa17.1■□□□□ 0.33
NUP98-201ENST00000324932 CNNM1Q9NRU3 951 aa17.1■□□□□ 0.33
NUP98-201ENST00000324932 CEP131Q9UPN4 1083 aa17.1■□□□□ 0.33
NUP98-201ENST00000324932 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
NUP98-201ENST00000324932 KIF6Q6ZMV9 814 aa17.1■□□□□ 0.33
NUP98-201ENST00000324932 NUP133Q8WUM0 1156 aa17.1■□□□□ 0.33
NUP98-201ENST00000324932 DESP17661 470 aa17.09■□□□□ 0.33
NUP98-201ENST00000324932 SMC1AQ14683 1233 aaKnown RBP17.09■□□□□ 0.33
NUP98-201ENST00000324932 CASQ1P31415 396 aa17.09■□□□□ 0.33
NUP98-201ENST00000324932 RRBP1Q9P2E9 1410 aaKnown RBP17.09■□□□□ 0.33
NUP98-201ENST00000324932 CCDC83Q8IWF9 413 aa17.09■□□□□ 0.33
NUP98-201ENST00000324932 GOLGA6L10A0A0M3HER8 536 aa17.08■□□□□ 0.32
NUP98-201ENST00000324932 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.32
NUP98-201ENST00000324932 TNNT1P13805 278 aa17.08■□□□□ 0.32
NUP98-201ENST00000324932 STK11IPQ8N1F8 1099 aa17.08■□□□□ 0.32
NUP98-201ENST00000324932 TOP1P11387 765 aaKnown RBP17.07■□□□□ 0.32
NUP98-201ENST00000324932 UBAC1Q9BSL1 405 aa17.07■□□□□ 0.32
NUP98-201ENST00000324932 PTPRGP23470 1445 aa17.07■□□□□ 0.32
NUP98-201ENST00000324932 SSBP05455 408 aaKnown RBP eCLIP17.07■□□□□ 0.32
NUP98-201ENST00000324932 AACSQ86V21 672 aa17.07■□□□□ 0.32
NUP98-201ENST00000324932 CLIP2Q9UDT6 1046 aa17.07■□□□□ 0.32
NUP98-201ENST00000324932 SMARCC1Q92922 1105 aaPredicted RBP17.07■□□□□ 0.32
NUP98-201ENST00000324932 CTAGE5O15320 804 aa17.06■□□□□ 0.32
NUP98-201ENST00000324932 PLEKHH1Q9ULM0 1364 aa17.06■□□□□ 0.32
NUP98-201ENST00000324932 CAMK4Q16566 473 aa17.06■□□□□ 0.32
NUP98-201ENST00000324932 ANKRD50Q9ULJ7 1429 aa17.06■□□□□ 0.32
NUP98-201ENST00000324932 PAFAH1B1P43034 410 aa17.06■□□□□ 0.32
NUP98-201ENST00000324932 CWC27Q6UX04 472 aaKnown RBP17.06■□□□□ 0.32
NUP98-201ENST00000324932 LUZP1Q86V48 1076 aa17.06■□□□□ 0.32
NUP98-201ENST00000324932 GSDMDP57764 484 aa17.05■□□□□ 0.32
NUP98-201ENST00000324932 MAP4K4O95819 1239 aaPredicted RBP17.05■□□□□ 0.32
NUP98-201ENST00000324932 IFFO1Q0D2I5 559 aa17.05■□□□□ 0.32
NUP98-201ENST00000324932 FKBP15Q5T1M5 1219 aa17.05■□□□□ 0.32
NUP98-201ENST00000324932 GTF2F1P35269 517 aaKnown RBP eCLIP17.05■□□□□ 0.32
NUP98-201ENST00000324932 SH2B1Q9NRF2 756 aaPredicted RBP17.05■□□□□ 0.32
NUP98-201ENST00000324932 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
NUP98-201ENST00000324932 PPP1R12BO60237 982 aaPredicted RBP17.04■□□□□ 0.32
NUP98-201ENST00000324932 SIL1Q9H173 461 aa17.04■□□□□ 0.32
NUP98-201ENST00000324932 GCOM1H8Y6P7 765 aaPredicted RBP17.04■□□□□ 0.32
NUP98-201ENST00000324932 POLR3GO15318 223 aaPredicted RBP17.04■□□□□ 0.32
NUP98-201ENST00000324932 MYZAPP0CAP1 466 aa17.04■□□□□ 0.32
NUP98-201ENST00000324932 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
NUP98-201ENST00000324932 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
NUP98-201ENST00000324932 CCDC113Q9H0I3 377 aa17.04■□□□□ 0.32
NUP98-201ENST00000324932 RNF187Q5TA31 235 aaPredicted RBP17.04■□□□□ 0.32
NUP98-201ENST00000324932 DYNC1I1O14576 645 aa17.04■□□□□ 0.32
NUP98-201ENST00000324932 VPS36Q86VN1 386 aa17.04■□□□□ 0.32
NUP98-201ENST00000324932 CCDC175P0C221 793 aa17.03■□□□□ 0.32
NUP98-201ENST00000324932 BMS1Q14692 1282 aaKnown RBP17.03■□□□□ 0.32
NUP98-201ENST00000324932 FERMT3Q86UX7 667 aa17.03■□□□□ 0.32
NUP98-201ENST00000324932 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
NUP98-201ENST00000324932 CUX1P39880 1505 aa17.03■□□□□ 0.32
NUP98-201ENST00000324932 GOLGA6L9A6NEM1 432 aa17.03■□□□□ 0.32
NUP98-201ENST00000324932 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
NUP98-201ENST00000324932 PRIMPOLQ96LW4 560 aa17.03■□□□□ 0.32
NUP98-201ENST00000324932 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
NUP98-201ENST00000324932 TICAM2Q86XR7 235 aa17.02■□□□□ 0.32
NUP98-201ENST00000324932 DDX19AQ9NUU7 478 aaKnown RBP17.02■□□□□ 0.32
NUP98-201ENST00000324932 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
NUP98-201ENST00000324932 STAMBPO95630 424 aa17.02■□□□□ 0.31
NUP98-201ENST00000324932 USP25Q9UHP3 1055 aa17.02■□□□□ 0.31
NUP98-201ENST00000324932 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
NUP98-201ENST00000324932 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
NUP98-201ENST00000324932 CEP126Q9P2H0 1117 aa17.01■□□□□ 0.31
NUP98-201ENST00000324932 NAA15Q9BXJ9 866 aaKnown RBP17.01■□□□□ 0.31
NUP98-201ENST00000324932 TDO2P48775 406 aa17.01■□□□□ 0.31
NUP98-201ENST00000324932 PPP4R3BQ5MIZ7 849 aa17.01■□□□□ 0.31
NUP98-201ENST00000324932 C16orf45Q96MC5 204 aaPredicted RBP17.01■□□□□ 0.31
NUP98-201ENST00000324932 YEATS4O95619 227 aa17■□□□□ 0.31
NUP98-201ENST00000324932 IBSPP21815 317 aaPredicted RBP17■□□□□ 0.31
NUP98-201ENST00000324932 SSR1P43307 286 aaKnown RBP17■□□□□ 0.31
NUP98-201ENST00000324932 IL1RAPL2Q9NP60 686 aa17■□□□□ 0.31
NUP98-201ENST00000324932 GPRASP1Q5JY77 1395 aa17■□□□□ 0.31
NUP98-201ENST00000324932 FAM177BA6PVY3 158 aa17■□□□□ 0.31
NUP98-201ENST00000324932 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
NUP98-201ENST00000324932 GIGYF2Q6Y7W6 1299 aaKnown RBP17■□□□□ 0.31
NUP98-201ENST00000324932 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
NUP98-201ENST00000324932 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
NUP98-201ENST00000324932 CACNA2D4Q7Z3S7 1137 aa17■□□□□ 0.31
NUP98-201ENST00000324932 NF2P35240 595 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 SULT6B1Q6IMI4 303 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 GSTTP1A0A1W2PQM5 241 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 UVSSAQ2YD98 709 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 SPECC1LQ69YQ0 1117 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
NUP98-201ENST00000324932 NEBLO76041 1014 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 CAVIN2O95810 425 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 SPECC1Q5M775 1068 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
NUP98-201ENST00000324932 TSG101Q99816 390 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 RAI14Q9P0K7 980 aa16.99■□□□□ 0.31
NUP98-201ENST00000324932 TIGD1Q96MW7 591 aa16.98■□□□□ 0.31
NUP98-201ENST00000324932 FGFR1OPO95684 399 aaKnown RBP16.98■□□□□ 0.31
NUP98-201ENST00000324932 IPO4Q8TEX9 1081 aaKnown RBP16.98■□□□□ 0.31
NUP98-201ENST00000324932 TNPO1Q92973 898 aaKnown RBP16.98■□□□□ 0.31
NUP98-201ENST00000324932 PAXBP1Q9Y5B6 917 aa16.98■□□□□ 0.31
NUP98-201ENST00000324932 ATF3P18847 181 aa16.98■□□□□ 0.31
NUP98-201ENST00000324932 MX1P20591 662 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms