RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 ERBB3P21860 1342 aa14.27□□□□□ -0.12
VWA3A-201ENST00000299840 IPO4Q8TEX9 1081 aaKnown RBP14.27□□□□□ -0.13
VWA3A-201ENST00000299840 CARD10Q9BWT7 1032 aa14.27□□□□□ -0.13
VWA3A-201ENST00000299840 FBLN1P23142 703 aa14.26□□□□□ -0.13
VWA3A-201ENST00000299840 SEPT12Q8IYM1 358 aa14.26□□□□□ -0.13
VWA3A-201ENST00000299840 AMPHP49418 695 aa14.25□□□□□ -0.13
VWA3A-201ENST00000299840 FAM98CQ17RN3 349 aaKnown RBP14.25□□□□□ -0.13
VWA3A-201ENST00000299840 INSRP06213 1382 aa14.25□□□□□ -0.13
VWA3A-201ENST00000299840 FLT4P35916 1363 aa14.25□□□□□ -0.13
VWA3A-201ENST00000299840 RRS1Q15050 365 aaKnown RBP14.25□□□□□ -0.13
VWA3A-201ENST00000299840 TOM1L2Q6ZVM7 507 aa14.25□□□□□ -0.13
VWA3A-201ENST00000299840 SMG6Q86US8 1419 aaKnown RBP14.25□□□□□ -0.13
VWA3A-201ENST00000299840 ANKRD24Q8TF21 1146 aa14.25□□□□□ -0.13
VWA3A-201ENST00000299840 DISP2A7MBM2 1401 aa14.24□□□□□ -0.13
VWA3A-201ENST00000299840 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
VWA3A-201ENST00000299840 CDCA7Q9BWT1 371 aaPredicted RBP14.23□□□□□ -0.13
VWA3A-201ENST00000299840 MORC1Q86VD1 984 aa14.23□□□□□ -0.13
VWA3A-201ENST00000299840 POLKQ9UBT6 870 aa14.23□□□□□ -0.13
VWA3A-201ENST00000299840 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
VWA3A-201ENST00000299840 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
VWA3A-201ENST00000299840 BRPF3Q9ULD4 1205 aa14.22□□□□□ -0.13
VWA3A-201ENST00000299840 KRT27Q7Z3Y8 459 aa14.21□□□□□ -0.13
VWA3A-201ENST00000299840 EMILIN1Q9Y6C2 1016 aa14.21□□□□□ -0.13
VWA3A-201ENST00000299840 USP35Q9P2H5 1018 aa14.21□□□□□ -0.13
VWA3A-201ENST00000299840 GTF2E1P29083 439 aaPredicted RBP14.2□□□□□ -0.14
VWA3A-201ENST00000299840 HSP90AB2PQ58FF8 381 aa14.2□□□□□ -0.14
VWA3A-201ENST00000299840 NLRP2Q9NX02 1062 aa14.19□□□□□ -0.14
VWA3A-201ENST00000299840 NCAPD2Q15021 1401 aa14.19□□□□□ -0.14
VWA3A-201ENST00000299840 FAM43AQ8N2R8 423 aa14.18□□□□□ -0.14
VWA3A-201ENST00000299840 UPF1Q92900 1129 aaKnown RBP eCLIP14.18□□□□□ -0.14
VWA3A-201ENST00000299840 ZFP91Q96JP5 570 aaPredicted RBP14.18□□□□□ -0.14
VWA3A-201ENST00000299840 PRDM4Q9UKN5 801 aa14.18□□□□□ -0.14
VWA3A-201ENST00000299840 BCCIPQ9P287 314 aaKnown RBP eCLIP14.18□□□□□ -0.14
VWA3A-201ENST00000299840 SBF2Q86WG5 1849 aa14.18□□□□□ -0.14
VWA3A-201ENST00000299840 A0A0G2JS52 829 aa14.17□□□□□ -0.14
VWA3A-201ENST00000299840 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
VWA3A-201ENST00000299840 RGPD1P0DJD0 1748 aa14.17□□□□□ -0.14
VWA3A-201ENST00000299840 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
VWA3A-201ENST00000299840 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
VWA3A-201ENST00000299840 CCDC125Q86Z20 511 aa14.16□□□□□ -0.14
VWA3A-201ENST00000299840 IL2RBP14784 551 aa14.16□□□□□ -0.14
VWA3A-201ENST00000299840 NBPF6Q5VWK0 638 aa14.16□□□□□ -0.14
VWA3A-201ENST00000299840 NBPF4Q96M43 638 aa14.16□□□□□ -0.14
VWA3A-201ENST00000299840 SHANK3Q9BYB0 1731 aa14.16□□□□□ -0.14
VWA3A-201ENST00000299840 BCL9O00512 1426 aa14.15□□□□□ -0.14
VWA3A-201ENST00000299840 TNS2Q63HR2 1409 aa14.15□□□□□ -0.14
VWA3A-201ENST00000299840 CANXP27824 592 aaKnown RBP14.15□□□□□ -0.14
VWA3A-201ENST00000299840 DDB1Q16531 1140 aa14.15□□□□□ -0.14
VWA3A-201ENST00000299840 PDE3BQ13370 1112 aa14.15□□□□□ -0.14
VWA3A-201ENST00000299840 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
VWA3A-201ENST00000299840 PPM1GO15355 546 aaPredicted RBP14.14□□□□□ -0.15
VWA3A-201ENST00000299840 IRX6P78412 446 aaPredicted RBP14.14□□□□□ -0.15
VWA3A-201ENST00000299840 PLEKHG2Q9H7P9 1386 aa14.14□□□□□ -0.15
VWA3A-201ENST00000299840 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
VWA3A-201ENST00000299840 TNS1Q9HBL0 1735 aaKnown RBP14.13□□□□□ -0.15
VWA3A-201ENST00000299840 EXOC5O00471 708 aa14.13□□□□□ -0.15
VWA3A-201ENST00000299840 EIF4A2Q14240 407 aaKnown RBP14.13□□□□□ -0.15
VWA3A-201ENST00000299840 FAM196AQ6ZSG2 479 aa14.13□□□□□ -0.15
VWA3A-201ENST00000299840 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
VWA3A-201ENST00000299840 OVOS2A0A0G2JMS6 1433 aa14.12□□□□□ -0.15
VWA3A-201ENST00000299840 EYA1Q99502 592 aa14.12□□□□□ -0.15
VWA3A-201ENST00000299840 MEGF6O75095 1541 aa14.12□□□□□ -0.15
VWA3A-201ENST00000299840 MTHFSP49914 203 aa14.11□□□□□ -0.15
VWA3A-201ENST00000299840 HSP90AA1P07900 732 aaKnown RBP14.11□□□□□ -0.15
VWA3A-201ENST00000299840 PARD3Q8TEW0 1356 aa14.11□□□□□ -0.15
VWA3A-201ENST00000299840 COL3A1P02461 1466 aaPredicted RBP14.11□□□□□ -0.15
VWA3A-201ENST00000299840 IGSF1Q8N6C5 1336 aa14.11□□□□□ -0.15
VWA3A-201ENST00000299840 DDX10Q13206 875 aaKnown RBP14.1□□□□□ -0.15
VWA3A-201ENST00000299840 TEX2Q8IWB9 1127 aa14.1□□□□□ -0.15
VWA3A-201ENST00000299840 MARCH10Q8NA82 808 aaPredicted RBP14.1□□□□□ -0.15
VWA3A-201ENST00000299840 HSP90B1P14625 803 aaKnown RBP14.1□□□□□ -0.15
VWA3A-201ENST00000299840 RGS3P49796 1198 aa14.1□□□□□ -0.15
VWA3A-201ENST00000299840 CDK11BP21127 795 aaKnown RBP14.09□□□□□ -0.15
VWA3A-201ENST00000299840 IL13P35225 146 aa14.09□□□□□ -0.15
VWA3A-201ENST00000299840 FTSJ3Q8IY81 847 aaKnown RBP14.09□□□□□ -0.15
VWA3A-201ENST00000299840 NEFMP07197 916 aa14.09□□□□□ -0.15
VWA3A-201ENST00000299840 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
VWA3A-201ENST00000299840 USHBP1Q8N6Y0 703 aa14.09□□□□□ -0.15
VWA3A-201ENST00000299840 RAPGEF4Q8WZA2 1011 aa14.09□□□□□ -0.15
VWA3A-201ENST00000299840 NHSQ6T4R5 1651 aa14.08□□□□□ -0.15
VWA3A-201ENST00000299840 TATP17735 454 aaPredicted RBP14.08□□□□□ -0.15
VWA3A-201ENST00000299840 FAM182BQ5T319 152 aa14.08□□□□□ -0.15
VWA3A-201ENST00000299840 FBXO3Q9UK99 471 aa14.08□□□□□ -0.15
VWA3A-201ENST00000299840 PPP2R1AP30153 589 aa14.08□□□□□ -0.16
VWA3A-201ENST00000299840 ZCRB1Q8TBF4 217 aaKnown RBP14.08□□□□□ -0.16
VWA3A-201ENST00000299840 RGPD3A6NKT7 1758 aaPredicted RBP14.08□□□□□ -0.16
VWA3A-201ENST00000299840 RGPD4Q7Z3J3 1758 aa14.08□□□□□ -0.16
VWA3A-201ENST00000299840 SECISBP2LQ93073 1101 aaKnown RBP14.07□□□□□ -0.16
VWA3A-201ENST00000299840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.07□□□□□ -0.16
VWA3A-201ENST00000299840 KAT6BQ8WYB5 2073 aa14.07□□□□□ -0.16
VWA3A-201ENST00000299840 KDRP35968 1356 aa14.07□□□□□ -0.16
VWA3A-201ENST00000299840 CHRM1P11229 460 aaPredicted RBP14.06□□□□□ -0.16
VWA3A-201ENST00000299840 RALBP1Q15311 655 aa14.06□□□□□ -0.16
VWA3A-201ENST00000299840 EP400Q96L91 3159 aa14.05□□□□□ -0.16
VWA3A-201ENST00000299840 DIAPH1O60610 1272 aaKnown RBP14.05□□□□□ -0.16
VWA3A-201ENST00000299840 SF3B2Q13435 895 aaKnown RBP14.05□□□□□ -0.16
VWA3A-201ENST00000299840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.05□□□□□ -0.16
VWA3A-201ENST00000299840 DOT1LQ8TEK3 1739 aa14.04□□□□□ -0.16
VWA3A-201ENST00000299840 CFAP53Q96M91 514 aa14.04□□□□□ -0.16
VWA3A-201ENST00000299840 PCDH11XQ9BZA7 1347 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms