RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 PREX2Q70Z35 1606 aa11.9□□□□□ -0.5
PCYT1A-201ENST00000292823 STRN4Q9NRL3 753 aa11.9□□□□□ -0.5
PCYT1A-201ENST00000292823 TRIM29Q14134 588 aa11.89□□□□□ -0.51
PCYT1A-201ENST00000292823 DHX8Q14562 1220 aaKnown RBP11.89□□□□□ -0.51
PCYT1A-201ENST00000292823 NAT10Q9H0A0 1025 aaKnown RBP11.89□□□□□ -0.51
PCYT1A-201ENST00000292823 HMGN5P82970 282 aaKnown RBP11.89□□□□□ -0.51
PCYT1A-201ENST00000292823 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
PCYT1A-201ENST00000292823 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
PCYT1A-201ENST00000292823 ZFYVE9O95405 1425 aa11.89□□□□□ -0.51
PCYT1A-201ENST00000292823 ZMYM3Q14202 1370 aa11.88□□□□□ -0.51
PCYT1A-201ENST00000292823 WAPLQ7Z5K2 1190 aa11.88□□□□□ -0.51
PCYT1A-201ENST00000292823 KDM5AP29375 1690 aaKnown RBP11.88□□□□□ -0.51
PCYT1A-201ENST00000292823 HDGFL1Q5TGJ6 251 aa11.88□□□□□ -0.51
PCYT1A-201ENST00000292823 CYP46A1Q9Y6A2 500 aa11.88□□□□□ -0.51
PCYT1A-201ENST00000292823 NUCB1Q02818 461 aa11.87□□□□□ -0.51
PCYT1A-201ENST00000292823 FSD1Q9BTV5 496 aa11.87□□□□□ -0.51
PCYT1A-201ENST00000292823 KDM5DQ9BY66 1539 aa11.87□□□□□ -0.51
PCYT1A-201ENST00000292823 KDM6BO15054 1643 aa11.87□□□□□ -0.51
PCYT1A-201ENST00000292823 A0A0U1RQG5 324 aaPredicted RBP11.87□□□□□ -0.51
PCYT1A-201ENST00000292823 CPLX1O14810 134 aa11.87□□□□□ -0.51
PCYT1A-201ENST00000292823 AKAP17AQ02040 695 aaKnown RBP11.87□□□□□ -0.51
PCYT1A-201ENST00000292823 TRDNQ13061 729 aa11.87□□□□□ -0.51
PCYT1A-201ENST00000292823 R3HCC1Q9Y3T6 440 aaKnown RBP11.87□□□□□ -0.51
PCYT1A-201ENST00000292823 ESPNB1AK53 854 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 TPM1P09493 284 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 ADCY10Q96PN6 1610 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 GOLGA6L1Q8N7Z2 621 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 ARAP3Q8WWN8 1544 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 SKAP1Q86WV1 359 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 SNX21Q969T3 373 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
PCYT1A-201ENST00000292823 ARID3AQ99856 593 aa11.85□□□□□ -0.51
PCYT1A-201ENST00000292823 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
PCYT1A-201ENST00000292823 TOMM22Q9NS69 142 aa11.85□□□□□ -0.51
PCYT1A-201ENST00000292823 ABCC1P33527 1531 aa11.85□□□□□ -0.51
PCYT1A-201ENST00000292823 ZNF396Q96N95 335 aaPredicted RBP11.85□□□□□ -0.51
PCYT1A-201ENST00000292823 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
PCYT1A-201ENST00000292823 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
PCYT1A-201ENST00000292823 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
PCYT1A-201ENST00000292823 CCDC192P0DO97 292 aa11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 CEBPAP49715 358 aaPredicted RBP11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 KRT28Q7Z3Y7 464 aa11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 GNL3LQ9NVN8 582 aaKnown RBP11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 SYNMO15061 1565 aa11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 PPIP5K1Q6PFW1 1433 aa11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 MBD5Q9P267 1494 aa11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 ZSCAN30Q86W11 494 aa11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 PHF23Q9BUL5 403 aaPredicted RBP11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 AIMP1Q12904 312 aaKnown RBP11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 MX1P20591 662 aa11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 TNPO1Q92973 898 aaKnown RBP11.84□□□□□ -0.51
PCYT1A-201ENST00000292823 HECW2Q9P2P5 1572 aa11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 ERICH2A1L162 156 aa11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 GPS2Q13227 327 aa11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 CCP110O43303 1012 aa11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 STARD3NLO95772 234 aa11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 NUTM2BA6NNL0 878 aaPredicted RBP11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 NUTM2EB1AL46 878 aaPredicted RBP11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 RNF214Q8ND24 703 aa11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 TBC1D2BQ9UPU7 963 aa11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 TPD52L1Q16890 204 aaPredicted RBP11.83□□□□□ -0.52
PCYT1A-201ENST00000292823 KRT85P78386 507 aa11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 RRP9O43818 475 aaKnown RBP11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 DHX16O60231 1041 aaKnown RBP11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 PDE4CQ08493 712 aa11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 KRT32Q14532 448 aa11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 TBC1D9Q6ZT07 1266 aa11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 NPHP3Q7Z494 1330 aa11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 DCAF8L1A6NGE4 600 aa11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 TSR1Q2NL82 804 aaKnown RBP11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 RALYLQ86SE5 291 aaKnown RBP11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 KIF1BPQ96EK5 621 aa11.82□□□□□ -0.52
PCYT1A-201ENST00000292823 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 ANKRD20A12PQ8NF67 263 aa11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 PDRG1Q9NUG6 133 aa11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 ZNF652Q9Y2D9 606 aa11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 SAFBQ15424 915 aaKnown RBP eCLIP11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 CTDP1Q9Y5B0 961 aaPredicted RBP11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 ARGLU1Q9NWB6 273 aaPredicted RBP11.81□□□□□ -0.52
PCYT1A-201ENST00000292823 MLH3Q9UHC1 1453 aa11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 ZSCAN25Q6NSZ9 544 aa11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 TBX22Q9Y458 520 aa11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 SLC3A2P08195 630 aaKnown RBP11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 NME9Q86XW9 330 aa11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 ACEP12821 1306 aa11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 KINO60870 393 aaKnown RBP11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 TAF7Q15545 349 aaPredicted RBP11.8□□□□□ -0.52
PCYT1A-201ENST00000292823 HSP90AB3PQ58FF7 597 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms