RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 SEC63Q9UGP8 760 aaKnown RBP15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 PAFAH1B1P43034 410 aa15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 TDO2P48775 406 aa15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 FBF1Q8TES7 1133 aa15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 TTC16Q8NEE8 873 aa15.4■□□□□ 0.06
SMARCA5-201ENST00000283131 UQCRHLA0A096LP55 91 aa15.4■□□□□ 0.06
SMARCA5-201ENST00000283131 KIF5CO60282 957 aa15.4■□□□□ 0.06
SMARCA5-201ENST00000283131 UQCRHP07919 91 aa15.4■□□□□ 0.06
SMARCA5-201ENST00000283131 PODXL2Q9NZ53 605 aa15.4■□□□□ 0.06
SMARCA5-201ENST00000283131 ZNF287Q9HBT7 754 aa15.4■□□□□ 0.06
SMARCA5-201ENST00000283131 CASQ1P31415 396 aa15.4■□□□□ 0.06
SMARCA5-201ENST00000283131 CFAP100Q494V2 611 aa15.4■□□□□ 0.06
SMARCA5-201ENST00000283131 CCDC160A6NGH7 325 aa15.39■□□□□ 0.06
SMARCA5-201ENST00000283131 WDR33Q9C0J8 1336 aaKnown RBP15.39■□□□□ 0.05
SMARCA5-201ENST00000283131 RUNDC1Q96C34 613 aa15.39■□□□□ 0.05
SMARCA5-201ENST00000283131 ACTN2P35609 894 aa15.39■□□□□ 0.05
SMARCA5-201ENST00000283131 LRSAM1Q6UWE0 723 aa15.39■□□□□ 0.05
SMARCA5-201ENST00000283131 IPO4Q8TEX9 1081 aaKnown RBP15.39■□□□□ 0.05
SMARCA5-201ENST00000283131 PAXIP1Q6ZW49 1069 aaPredicted RBP15.39■□□□□ 0.05
SMARCA5-201ENST00000283131 NAA15Q9BXJ9 866 aaKnown RBP15.39■□□□□ 0.05
SMARCA5-201ENST00000283131 APBB1IPQ7Z5R6 666 aaPredicted RBP15.39■□□□□ 0.05
SMARCA5-201ENST00000283131 CETN1Q12798 172 aa15.38■□□□□ 0.05
SMARCA5-201ENST00000283131 DDX46Q7L014 1031 aaKnown RBP15.38■□□□□ 0.05
SMARCA5-201ENST00000283131 GPATCH11Q8N954 259 aa15.38■□□□□ 0.05
SMARCA5-201ENST00000283131 PLCD3Q8N3E9 789 aa15.38■□□□□ 0.05
SMARCA5-201ENST00000283131 NOL3O60936 208 aaKnown RBP15.38■□□□□ 0.05
SMARCA5-201ENST00000283131 BBXQ8WY36 941 aaPredicted RBP15.38■□□□□ 0.05
SMARCA5-201ENST00000283131 LARP1BQ659C4 914 aaKnown RBP15.38■□□□□ 0.05
SMARCA5-201ENST00000283131 UBA5Q9GZZ9 404 aa15.38■□□□□ 0.05
SMARCA5-201ENST00000283131 KIF2AO00139 706 aaPredicted RBP15.38■□□□□ 0.05
SMARCA5-201ENST00000283131 USO1O60763 962 aaKnown RBP15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 RBM25P49756 843 aaKnown RBP15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 CA8P35219 290 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 FILIP1Q7Z7B0 1213 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 CCDC144AA2RUR9 1427 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 PSMC4P43686 418 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 CEP135Q66GS9 1140 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 DDX12PQ92771 950 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 PPP1R9BQ96SB3 815 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 NDC80O14777 642 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 HLTFQ14527 1009 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■□□□□ 10.3
SMARCA5-201ENST00000283131 ZSCAN12O43309 604 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 ANAPC4Q9UJX5 808 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 HMOX1P09601 288 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 WDR78Q5VTH9 848 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 SPATA32Q96LK8 384 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 RAI14Q9P0K7 980 aa15.37■□□□□ 0.05
SMARCA5-201ENST00000283131 SH3BP5O60239 455 aa15.36■□□□□ 0.05
SMARCA5-201ENST00000283131 MAP7D1Q3KQU3 841 aa15.36■□□□□ 0.05
SMARCA5-201ENST00000283131 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 MXRA7P84157 204 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 CFAP58Q5T655 872 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 FMN1Q68DA7 1419 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 POLR3GO15318 223 aaPredicted RBP15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 CTNNA3Q9UI47 895 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 TPD52P55327 224 aaPredicted RBP15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 ZNF354CQ86Y25 554 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 MKRN1Q9UHC7 482 aaKnown RBP15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 ODF2LQ9ULJ1 636 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 MAP3K9P80192 1104 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 KIF4BQ2VIQ3 1234 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 CCDC83Q8IWF9 413 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 A0A1W2PRG0 241 aa15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 HNRNPMP52272 730 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 FKBP4Q02790 459 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMARCA5-201ENST00000283131 SMG6Q86US8 1419 aaKnown RBP15.34■□□□□ 0.05
SMARCA5-201ENST00000283131 TNNT1P13805 278 aa15.34■□□□□ 0.05
SMARCA5-201ENST00000283131 HMGB2P26583 209 aaKnown RBP15.34■□□□□ 0.05
SMARCA5-201ENST00000283131 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
SMARCA5-201ENST00000283131 CCDC6Q16204 474 aa15.34■□□□□ 0.05
SMARCA5-201ENST00000283131 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
SMARCA5-201ENST00000283131 EHMT1Q9H9B1 1298 aa15.34■□□□□ 0.05
SMARCA5-201ENST00000283131 GNAI2P04899 355 aa15.34■□□□□ 0.05
SMARCA5-201ENST00000283131 TTLL12Q14166 644 aaPredicted RBP15.34■□□□□ 0.05
SMARCA5-201ENST00000283131 DNA2P51530 1060 aa15.33■□□□□ 0.04
SMARCA5-201ENST00000283131 CUL5Q93034 780 aa15.33■□□□□ 0.04
SMARCA5-201ENST00000283131 CALCOCO1Q9P1Z2 691 aa15.33■□□□□ 0.04
SMARCA5-201ENST00000283131 ZBED9Q6R2W3 1325 aa15.33■□□□□ 0.04
SMARCA5-201ENST00000283131 ST20-MTHFSA0A0A6YYL1 179 aa15.33■□□□□ 0.04
SMARCA5-201ENST00000283131 DYNC1I1O14576 645 aa15.33■□□□□ 0.04
SMARCA5-201ENST00000283131 IQCGQ9H095 443 aaKnown RBP15.33■□□□□ 0.04
SMARCA5-201ENST00000283131 KIF20AO95235 890 aa15.33■□□□□ 0.04
SMARCA5-201ENST00000283131 LRP2BPQ9P2M1 347 aa15.33■□□□□ 0.04
SMARCA5-201ENST00000283131 TDRD12Q587J7 1177 aaKnown RBP15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 PTPN14Q15678 1187 aa15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 CRACR2BQ8N4Y2 399 aaPredicted RBP15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 OTUD6BQ8N6M0 293 aa15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 PRPF31Q8WWY3 499 aaKnown RBP15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 L3MBTL2Q969R5 705 aa15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 FAM114A1Q8IWE2 563 aa15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 KIF18AQ8NI77 898 aa15.32■□□□□ 0.04
SMARCA5-201ENST00000283131 KIF3CO14782 793 aa15.31■□□□□ 0.04
SMARCA5-201ENST00000283131 PDIA4P13667 645 aaKnown RBP15.31■□□□□ 0.04
SMARCA5-201ENST00000283131 SFPQP23246 707 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMARCA5-201ENST00000283131 PRPF4BQ13523 1007 aaKnown RBP15.31■□□□□ 0.04
SMARCA5-201ENST00000283131 PLEKHO1Q53GL0 409 aaPredicted RBP15.31■□□□□ 0.04
SMARCA5-201ENST00000283131 ALS2CR12Q96Q35 445 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms