RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 BLOC1S3Q6QNY0 202 aa10.86□□□□□ -0.67
CCL1-201ENST00000225842 SRCAPQ6ZRS2 3230 aa10.86□□□□□ -0.67
CCL1-201ENST00000225842 ZBBXA8MT70 800 aa10.85□□□□□ -0.67
CCL1-201ENST00000225842 KANK4Q5T7N3 995 aaPredicted RBP10.85□□□□□ -0.67
CCL1-201ENST00000225842 CCDC27Q2M243 656 aa10.84□□□□□ -0.67
CCL1-201ENST00000225842 FKBPLQ9UIM3 349 aa10.84□□□□□ -0.67
CCL1-201ENST00000225842 MLH3Q9UHC1 1453 aa10.84□□□□□ -0.67
CCL1-201ENST00000225842 KDM5CP41229 1560 aa10.84□□□□□ -0.67
CCL1-201ENST00000225842 CEP170BQ9Y4F5 1589 aaPredicted RBP10.83□□□□□ -0.68
CCL1-201ENST00000225842 LRCH3Q96II8 777 aa10.83□□□□□ -0.68
CCL1-201ENST00000225842 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
CCL1-201ENST00000225842 ALKQ9UM73 1620 aa10.83□□□□□ -0.68
CCL1-201ENST00000225842 SAMD9Q5K651 1589 aa10.82□□□□□ -0.68
CCL1-201ENST00000225842 BHMG1C9JSJ3 638 aaPredicted RBP10.82□□□□□ -0.68
CCL1-201ENST00000225842 SKIP12755 728 aa10.82□□□□□ -0.68
CCL1-201ENST00000225842 PBX2P40425 430 aa10.82□□□□□ -0.68
CCL1-201ENST00000225842 SND1Q7KZF4 910 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCL1-201ENST00000225842 ANKLE2Q86XL3 938 aa10.82□□□□□ -0.68
CCL1-201ENST00000225842 STK32AQ8WU08 396 aa10.82□□□□□ -0.68
CCL1-201ENST00000225842 MAP10Q9P2G4 905 aa10.82□□□□□ -0.68
CCL1-201ENST00000225842 ZMIZ1Q9ULJ6 1067 aa10.82□□□□□ -0.68
CCL1-201ENST00000225842 USP17L3A6NCW0 530 aa10.81□□□□□ -0.68
CCL1-201ENST00000225842 USP17L4A6NCW7 530 aa10.81□□□□□ -0.68
CCL1-201ENST00000225842 TMEM164Q5U3C3 297 aa10.81□□□□□ -0.68
CCL1-201ENST00000225842 USP17L2Q6R6M4 530 aa10.81□□□□□ -0.68
CCL1-201ENST00000225842 USP17L1Q7RTZ2 530 aa10.81□□□□□ -0.68
CCL1-201ENST00000225842 DEPDC4Q8N2C3 294 aa10.81□□□□□ -0.68
CCL1-201ENST00000225842 MRPL50Q8N5N7 158 aaKnown RBP10.81□□□□□ -0.68
CCL1-201ENST00000225842 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.81□□□□□ -0.68
CCL1-201ENST00000225842 ARHGAP5Q13017 1502 aa10.8□□□□□ -0.68
CCL1-201ENST00000225842 F12P00748 615 aaPredicted RBP10.8□□□□□ -0.68
CCL1-201ENST00000225842 NOVA2Q9UNW9 492 aaKnown RBP10.8□□□□□ -0.68
CCL1-201ENST00000225842 CDK11AQ9UQ88 783 aaPredicted RBP10.8□□□□□ -0.68
CCL1-201ENST00000225842 ABCA6Q8N139 1617 aa10.8□□□□□ -0.68
CCL1-201ENST00000225842 USP17L5A8MUK1 530 aa10.79□□□□□ -0.68
CCL1-201ENST00000225842 GGT6Q6P531 493 aa10.79□□□□□ -0.68
CCL1-201ENST00000225842 BRICD5Q6PL45 260 aa10.79□□□□□ -0.68
CCL1-201ENST00000225842 FAM174AQ8TBP5 190 aa10.79□□□□□ -0.68
CCL1-201ENST00000225842 MYO3AQ8NEV4 1616 aa10.79□□□□□ -0.68
CCL1-201ENST00000225842 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
CCL1-201ENST00000225842 CTHP32929 405 aa10.78□□□□□ -0.68
CCL1-201ENST00000225842 ELOAQ14241 798 aaKnown RBP10.78□□□□□ -0.68
CCL1-201ENST00000225842 B4GALNT3Q6L9W6 998 aa10.78□□□□□ -0.68
CCL1-201ENST00000225842 NFATC2IPQ8NCF5 419 aa10.78□□□□□ -0.68
CCL1-201ENST00000225842 A2ML1A8K2U0 1454 aa10.78□□□□□ -0.68
CCL1-201ENST00000225842 ZNF142P52746 1687 aaPredicted RBP10.78□□□□□ -0.68
CCL1-201ENST00000225842 PRR14Q9BWN1 585 aa10.77□□□□□ -0.69
CCL1-201ENST00000225842 JUNDP17535 347 aa10.76□□□□□ -0.69
CCL1-201ENST00000225842 EMP3P54852 163 aa10.76□□□□□ -0.69
CCL1-201ENST00000225842 SCUBE3Q8IX30 993 aa10.76□□□□□ -0.69
CCL1-201ENST00000225842 TRIM52Q96A61 297 aa10.76□□□□□ -0.69
CCL1-201ENST00000225842 GNEQ9Y223 722 aaKnown RBP10.76□□□□□ -0.69
CCL1-201ENST00000225842 VWDEQ8N2E2 1590 aa10.76□□□□□ -0.69
CCL1-201ENST00000225842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCL1-201ENST00000225842 MROH2AA6NES4 1674 aa10.76□□□□□ -0.69
CCL1-201ENST00000225842 LRRC7Q96NW7 1537 aa10.75□□□□□ -0.69
CCL1-201ENST00000225842 FMNL1O95466 1100 aaPredicted RBP10.75□□□□□ -0.69
CCL1-201ENST00000225842 PLEKHM2Q8IWE5 1019 aa10.75□□□□□ -0.69
CCL1-201ENST00000225842 ZNF687Q8N1G0 1237 aa10.75□□□□□ -0.69
CCL1-201ENST00000225842 THEMISQ8N1K5 641 aaPredicted RBP10.75□□□□□ -0.69
CCL1-201ENST00000225842 ZC3H4Q9UPT8 1303 aaKnown RBP10.75□□□□□ -0.69
CCL1-201ENST00000225842 NPHP4O75161 1426 aaPredicted RBP10.75□□□□□ -0.69
CCL1-201ENST00000225842 APLP1P51693 650 aa10.74□□□□□ -0.69
CCL1-201ENST00000225842 PTPRNQ16849 979 aa10.74□□□□□ -0.69
CCL1-201ENST00000225842 CRTC2Q53ET0 693 aaPredicted RBP10.74□□□□□ -0.69
CCL1-201ENST00000225842 MARVELD3Q96A59 401 aa10.74□□□□□ -0.69
CCL1-201ENST00000225842 THAP11Q96EK4 314 aa10.74□□□□□ -0.69
CCL1-201ENST00000225842 OTUD5Q96G74 571 aa10.74□□□□□ -0.69
CCL1-201ENST00000225842 MKRN1Q9UHC7 482 aaKnown RBP10.74□□□□□ -0.69
CCL1-201ENST00000225842 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
CCL1-201ENST00000225842 NEURL4Q96JN8 1562 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 DNMT1P26358 1616 aaKnown RBP10.73□□□□□ -0.69
CCL1-201ENST00000225842 SETD1AO15047 1707 aaKnown RBP10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L15C9J2P7 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L10C9JJH3 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L13C9JLJ4 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L12C9JPN9 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L11C9JVI0 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L21D6R901 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L18D6R9N7 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L22D6RA61 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L17D6RBQ6 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L19D6RCP7 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L20D6RJB6 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 E9PSI1 815 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 PPP4CP60510 307 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 USP17L24Q0WX57 530 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 PCDHB3Q9Y5E6 796 aa10.73□□□□□ -0.69
CCL1-201ENST00000225842 SUPT6HQ7KZ85 1726 aaKnown RBP10.72□□□□□ -0.69
CCL1-201ENST00000225842 MYO5CQ9NQX4 1742 aa10.72□□□□□ -0.69
CCL1-201ENST00000225842 FAM205CA6NFA0 338 aa10.72□□□□□ -0.69
CCL1-201ENST00000225842 TK2O00142 265 aa10.72□□□□□ -0.69
CCL1-201ENST00000225842 NCOA4Q13772 614 aa10.72□□□□□ -0.69
CCL1-201ENST00000225842 SLFNL1Q499Z3 407 aa10.72□□□□□ -0.69
CCL1-201ENST00000225842 PHLDB3Q6NSJ2 640 aa10.72□□□□□ -0.69
CCL1-201ENST00000225842 CEP126Q9P2H0 1117 aa10.72□□□□□ -0.69
CCL1-201ENST00000225842 HPS5Q9UPZ3 1129 aa10.72□□□□□ -0.69
CCL1-201ENST00000225842 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
CCL1-201ENST00000225842 SPAG9O60271 1321 aaKnown RBP10.72□□□□□ -0.69
CCL1-201ENST00000225842 FAM135BQ49AJ0 1406 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms