RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Ggt6Q6PDE7 497 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Vps37cQ8R105 352 aa10.6□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Arfgap2Q99K28 520 aa10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Phldb1Q6PDH0 1371 aaKnown RBP10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Fbf1A2A870 1173 aa10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Gnai2P08752 355 aaKnown RBP10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Grpel1Q99LP6 217 aa10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Senp3Q9EP97 568 aaKnown RBP10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Erich4Q3UNU4 136 aa10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Jakmip1Q8BVL9 626 aa10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Ccdc158Q8CDI6 1109 aa10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Stx1aO35526 288 aa10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Specc1lQ2KN98 1118 aaKnown RBP10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Fbxo3Q9DC63 480 aa10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Plagl1Q9JLQ4 704 aa10.59□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Sycp2Q9CUU3 1500 aa10.58□□□□□ -0.71
Ptpre-204ENSMUST00000209979 Cfap157Q0VFX2 523 aa10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Gsdma3Q5Y4Y6 464 aa10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Bms1Q6PGF5 1284 aaKnown RBP10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Homer1Q9Z2Y3 366 aa10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Stmn4P63042 189 aa10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Fmnl3Q6ZPF4 1028 aa10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Vps18Q8R307 973 aa10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Rab3gap2Q8BMG7 1366 aa10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Gm21680A0A0G2JGR8 267 aa10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Cfdp1O88271 295 aaKnown RBP10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Znf653Q6YND2 615 aa10.58□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ccdc121E9Q6D3 323 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Sox12Q04890 314 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Zfp251Q6PCX8 632 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ddx58Q6Q899 926 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Eif2aQ8BJW6 581 aaKnown RBP10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Tnip1Q9WUU8 647 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Cavin4A2AMM0 362 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Gbp9Q8BTS3 619 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Top1mtQ8R4U6 593 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Fam76aQ922G2 307 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Stk3Q9JI10 497 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Mmel1Q9JLI3 765 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Igbp1bQ9QZ29 343 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Stxbp4Q9WV89 557 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Stk11ipQ3TAA7 1072 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Brd3Q8K2F0 726 aaKnown RBP10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Syap1Q9D5V6 365 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Dpf1Q9QX66 387 aa10.57□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Clcn1Q64347 994 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Gucy1a3Q9ERL9 691 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 FanciQ8K368 1330 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Aimp1P31230 310 aaKnown RBP10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Usp40Q8BWR4 1235 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Six6os1Q9CTN5 574 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Rfc1P35601 1131 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Opa1P58281 960 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Strn4P58404 760 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Mterf4Q8BVN4 346 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Smc5Q8CG46 1101 aaKnown RBP10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Golga5Q9QYE6 729 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Rapgef2Q8CHG7 1496 aa10.56□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Cecr2E9Q2Z1 1453 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ube2hP62257 183 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Brd2Q7JJ13 798 aaKnown RBP10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Naa25Q8BWZ3 972 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Tmc2Q8R4P4 888 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Gng11P61953 73 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Bag4Q8CI61 457 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ebag9Q9D0V7 213 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Nol7Q9D7Z3 254 aaKnown RBP10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Elp1Q7TT37 1333 aaKnown RBP10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Agtpbp1Q641K1 1218 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Tacc1Q6Y685 774 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Rufy2Q8R4C2 606 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Fsd1Q7TPM6 496 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Pip4k2bQ80XI4 416 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ccdc150Q8CDI7 1110 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ccdc12Q8R344 166 aaKnown RBP10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Trim11Q99PQ2 467 aa10.55□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Mcm6P97311 821 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Gramd4Q8CB44 633 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Chmp7Q8R1T1 451 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Calml4Q91WQ9 153 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Gbp7Q91Z40 638 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Cdca8Q8BHX3 289 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Rnf34Q99KR6 376 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 HypkQ9CR41 129 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Hip1rQ9JKY5 1068 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 GmnnO88513 206 aa10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 CarsQ9ER72 831 aaKnown RBP10.54□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Zscan20B2KFW1 1030 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Gnl3lQ6PGG6 577 aaKnown RBP10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Sdad1Q80UZ2 687 aaKnown RBP10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Hook3Q8BUK6 718 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Irx4Q9QY61 515 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 LrpprcQ6PB66 1392 aaKnown RBP10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Ccdc6D3YZP9 469 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Terf2O35144 541 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Sept7O55131 436 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Hmgb1P63158 215 aaKnown RBP10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Plekhg5Q66T02 1073 aa10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 ImmtQ8CAQ8 757 aaKnown RBP10.53□□□□□ -0.72
Ptpre-204ENSMUST00000209979 Itgb1bp2Q9R000 350 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms