RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Rapgef3Q8VCC8 918 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Ncapd2Q8K2Z4 1392 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Prim1P20664 417 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 HdgfP51859 237 aaKnown RBP11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Amotl2Q8K371 772 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Kcna6Q61923 529 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Egfem1Q8C088 590 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Kif20bQ80WE4 1774 aaKnown RBP11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Cyb5rlB1AS42 316 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Triml2E9PW10 424 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Dixdc1Q80Y83 711 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 TkfcQ8VC30 578 aa11.95□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Dnai1Q8C0M8 701 aa11.94□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Nol11Q8BJW5 723 aaKnown RBP11.93□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Snap23O09044 210 aa11.93□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Eif4g2Q62448 906 aaKnown RBP11.93□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Amotl1Q9D4H4 968 aa11.93□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Chd4Q6PDQ2 1915 aaKnown RBP11.93□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 N4bp2F8VQG7 1678 aaKnown RBP11.93□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Ccdc27Q3V036 639 aa11.93□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Cgnl1Q6AW69 1298 aa11.92□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Topaz1E5FYH1 1653 aa11.92□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 D430041D05RikF6ZGR6 1678 aa11.92□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Zranb3Q6NZP1 1069 aa11.91□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Cetn4Q8K4K1 168 aa11.91□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Aplp1Q03157 653 aa11.91□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Sart3Q9JLI8 962 aaKnown RBP11.91□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Spef2Q8C9J3 1734 aa11.91□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Col16a1Q8BLX7 1580 aa11.91□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Mfap1aC0HKD8 439 aaKnown RBP11.91□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Mfap1bC0HKD9 439 aaKnown RBP11.91□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Chmp7Q8R1T1 451 aa11.91□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 C5P06684 1680 aa11.9□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 AU019823E9PUQ3 292 aa11.9□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Wwc1Q5SXA9 1104 aa11.9□□□□□ -0.5
Sh3rf1-202ENSMUST00000209611 Kdm6aO70546 1401 aa11.9□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Ccdc146E9Q9F7 977 aa11.89□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 C3P01027 1663 aa11.89□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Btbd11Q6GQW0 1109 aa11.89□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Cc2d1aQ8K1A6 943 aa11.89□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Kif18aQ91WD7 886 aa11.89□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Chpf2Q3UU43 768 aa11.89□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Chl1P70232 1209 aa11.88□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Col14a1Q80X19 1797 aa11.88□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Mon2Q80TL7 1715 aa11.88□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Rimbp3Q3V0F0 1606 aa11.88□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Med1Q925J9 1575 aa11.87□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Ddx17Q501J6 650 aaKnown RBP11.87□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Eif2s2Q99L45 331 aaKnown RBP11.87□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Fkbp4P30416 458 aa11.87□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 MarsQ68FL6 902 aaKnown RBP11.87□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Parp14Q2EMV9 1817 aa11.87□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Aifm3Q3TY86 605 aa11.87□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 CarsQ9ER72 831 aaKnown RBP11.87□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Als2Q920R0 1651 aa11.87□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Pik3c2aQ61194 1686 aa11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Fam83gQ5SWY7 812 aa11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Aldh1l2Q8K009 923 aa11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Phlpp2Q8BXA7 1320 aa11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Nrxn3Q6P9K9 1571 aa11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Prkar2bP31324 416 aa11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Foxp4Q9DBY0 795 aaKnown RBP11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Gnai2P08752 355 aaKnown RBP11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 PsapQ61207 557 aaKnown RBP11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 OptnQ8K3K8 584 aa11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Cog6Q8R3I3 657 aa11.86□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Bcl2l13P59017 434 aa11.85□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Zpr1Q62384 459 aa11.85□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Igsf1Q7TQA1 1317 aa11.84□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 TnrQ8BYI9 1358 aa11.84□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Plekhd1B2RPU2 505 aa11.84□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 4930572O03RikQ8C5Y0 211 aa11.84□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Trim27Q62158 513 aa11.84□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 ZgpatQ8VDM1 511 aa11.84□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 Gcc1Q9D4H2 778 aa11.84□□□□□ -0.51
Sh3rf1-202ENSMUST00000209611 CrklP47941 303 aa11.83□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Mcm2P97310 904 aa11.83□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Fam50bQ9WTJ8 334 aa11.83□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Kif24Q6NWW5 1356 aa11.83□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Card10P58660 1021 aa11.83□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Brd1E9PZ26 1189 aaKnown RBP11.83□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 LifrP42703 1092 aa11.82□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Ccdc155Q80VJ8 648 aa11.82□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 ThemisQ8BGW0 636 aa11.82□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Camta1A2A891 1682 aa11.82□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Rabep1O35551 862 aa11.82□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Mdc1Q5PSV9 1707 aa11.82□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Alpk3Q924C5 1678 aa11.82□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Vgll3P85442 326 aa11.82□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Bcl11bQ99PV8 884 aa11.82□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Cfdp1O88271 295 aaKnown RBP11.81□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Ggt6Q6PDE7 497 aa11.81□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 NalcnQ8BXR5 1738 aa11.81□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Fam13aQ8BGI4 693 aa11.81□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Tmc1Q8R4P5 757 aa11.81□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Atf5O70191 283 aa11.81□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Mphosph10Q810V0 681 aaKnown RBP11.81□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Nek4Q9Z1J2 792 aa11.81□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Tnnt2P50752 301 aa11.8□□□□□ -0.52
Sh3rf1-202ENSMUST00000209611 Nphp1Q9QY53 687 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 1005 ms