RNA–Protein interactions for RNA: ENSMUST00000198180.4

Csde1-211, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-211ENSMUST00000198180 Tbc1d9Q3UYK3 1264 aa9.42□□□□□ -0.9
Csde1-211ENSMUST00000198180 Q4VA45 678 aa9.42□□□□□ -0.9
Csde1-211ENSMUST00000198180 Bcar3Q9QZK2 820 aa9.42□□□□□ -0.9
Csde1-211ENSMUST00000198180 Astn2Q80Z10 1352 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Adgrb3Q80ZF8 1522 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Hoxc9P09633 260 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Jakmip1Q8BVL9 626 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Abca9Q8K449 1623 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Prex1Q69ZK0 1650 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Zap70P43404 618 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Plxnc1Q9QZC2 1574 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Iqgap3F8VQ29 1632 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Wdr63B2RY71 923 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Ddx17Q501J6 650 aaKnown RBP9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Ptpdc1Q6NZK8 747 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Ppip5k2Q6ZQB6 1129 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Erich6bQ9D4S6 220 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Fam135bQ9DAI6 1403 aa9.41□□□□□ -0.9
Csde1-211ENSMUST00000198180 Cep152A2AUM9 1736 aaKnown RBP9.4□□□□□ -0.9
Csde1-211ENSMUST00000198180 Xrn1P97789 1719 aaKnown RBP9.4□□□□□ -0.9
Csde1-211ENSMUST00000198180 CalcaP70160 136 aa9.4□□□□□ -0.9
Csde1-211ENSMUST00000198180 Setd1aE9PYH6 1716 aa9.4□□□□□ -0.9
Csde1-211ENSMUST00000198180 Hs1bp3Q3TC93 395 aa9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 Erc2Q6PH08 957 aa9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 PogkQ80TC5 607 aa9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 Nol11Q8BJW5 723 aaKnown RBP9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 Arhgap23Q69ZH9 1483 aa9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 Ercc6l2Q9JIM3 1537 aa9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 Brd1E9PZ26 1189 aaKnown RBP9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 Nol8Q3UHX0 1147 aaKnown RBP9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 St18Q80TY4 1045 aa9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 CrebrfQ8CDG5 640 aaKnown RBP9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 Fndc1E9Q043 1732 aa9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 Atp6v1dP57746 247 aa9.39□□□□□ -0.91
Csde1-211ENSMUST00000198180 Smarce1O54941 411 aaKnown RBP9.38□□□□□ -0.91
Csde1-211ENSMUST00000198180 Nkx1-2P42580 305 aa9.38□□□□□ -0.91
Csde1-211ENSMUST00000198180 Smc4Q8CG47 1286 aa9.38□□□□□ -0.91
Csde1-211ENSMUST00000198180 Smg7Q5RJH6 1138 aaKnown RBP9.38□□□□□ -0.91
Csde1-211ENSMUST00000198180 Slain2Q8CI08 581 aa9.38□□□□□ -0.91
Csde1-211ENSMUST00000198180 PtmsQ9D0J8 101 aaKnown RBP9.38□□□□□ -0.91
Csde1-211ENSMUST00000198180 Cep170bQ80U49 1574 aa9.38□□□□□ -0.91
Csde1-211ENSMUST00000198180 1700010I14RikQ7TPG0 532 aa9.38□□□□□ -0.91
Csde1-211ENSMUST00000198180 Ahdc1Q6PAL7 1594 aaKnown RBP9.37□□□□□ -0.91
Csde1-211ENSMUST00000198180 4930572O03RikQ8C5Y0 211 aa9.37□□□□□ -0.91
Csde1-211ENSMUST00000198180 Adgrl1Q80TR1 1466 aa9.37□□□□□ -0.91
Csde1-211ENSMUST00000198180 Pdcd11Q6NS46 1862 aaKnown RBP9.37□□□□□ -0.91
Csde1-211ENSMUST00000198180 Tbc1d32Q3URV1 1296 aa9.37□□□□□ -0.91
Csde1-211ENSMUST00000198180 Jarid2Q62315 1234 aa9.37□□□□□ -0.91
Csde1-211ENSMUST00000198180 Map3k2Q61083 619 aa9.37□□□□□ -0.91
Csde1-211ENSMUST00000198180 Ssh1Q76I79 1042 aa9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Tshz3Q8CGV9 1081 aa9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Myo5cE9Q1F5 1742 aa9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Plekhg1F6S200 1446 aa9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Znf326O88291 580 aa9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Babam1Q3UI43 333 aa9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Cavin2Q63918 418 aaKnown RBP9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Slc5a1Q8C3K6 665 aa9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Ddx11Q6AXC6 880 aa9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Med14A2ABV5 1459 aaKnown RBP9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 RereQ80TZ9 1558 aa9.36□□□□□ -0.91
Csde1-211ENSMUST00000198180 Eif3bQ8JZQ9 803 aaKnown RBP9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 Amotl1Q9D4H4 968 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 FosbP13346 338 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 Ttc41Q692V3 1318 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 Ttc19Q8CC21 365 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 KinQ8K339 391 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 Itsn2Q9Z0R6 1659 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 Cdc42bpgQ80UW5 1551 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 FancaQ9JL70 1439 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 LifrP42703 1092 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 Usp48Q3V0C5 1052 aa9.35□□□□□ -0.91
Csde1-211ENSMUST00000198180 Catsper2A2ARP9 588 aa9.34□□□□□ -0.91
Csde1-211ENSMUST00000198180 Brf1Q8CFK2 676 aa9.34□□□□□ -0.91
Csde1-211ENSMUST00000198180 Slc26a8Q8R0C3 999 aa9.34□□□□□ -0.91
Csde1-211ENSMUST00000198180 Clasp1Q80TV8 1535 aaKnown RBP9.34□□□□□ -0.91
Csde1-211ENSMUST00000198180 OptnQ8K3K8 584 aa9.34□□□□□ -0.91
Csde1-211ENSMUST00000198180 Eif2ak4Q9QZ05 1648 aa9.34□□□□□ -0.91
Csde1-211ENSMUST00000198180 Stard3nlQ9DCI3 235 aa9.34□□□□□ -0.91
Csde1-211ENSMUST00000198180 AU015836B2RUM3 263 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 GpkowQ56A08 488 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 NexnQ7TPW1 607 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 ApobrQ8VBT6 942 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 GckrQ91X44 587 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Smc3Q9CW03 1217 aaKnown RBP9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 IghaA0A0A6YXW6 389 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Pa2g4P50580 394 aaKnown RBP9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Irf9Q61179 399 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Fkbp5Q64378 456 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Ankib1Q6ZPS6 1085 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Slc39a6Q8C145 765 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Echdc1Q9D9V3 322 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Pik3r4Q8VD65 1358 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Plekhd1B2RPU2 505 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Terf2O35144 541 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Soga3Q6NZL0 945 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Kiaa0556Q8C753 1610 aa9.33□□□□□ -0.92
Csde1-211ENSMUST00000198180 Cpa2Q504N0 417 aa9.32□□□□□ -0.92
Csde1-211ENSMUST00000198180 Zkscan1Q8BGS3 561 aaKnown RBP9.32□□□□□ -0.92
Csde1-211ENSMUST00000198180 Mad1l1Q9WTX8 717 aaKnown RBP9.32□□□□□ -0.92
Csde1-211ENSMUST00000198180 Cyb5rlB1AS42 316 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 83.2 ms