RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Tshz3Q8CGV9 1081 aa13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 NgdnQ9DB96 315 aaKnown RBP13.1□□□□□ -0.31
Msh3-202ENSMUST00000185852 EappQ5BU09 281 aa13.09□□□□□ -0.31
Msh3-202ENSMUST00000185852 Filip1lQ6P6L0 1131 aa13.09□□□□□ -0.31
Msh3-202ENSMUST00000185852 CrcpO35427 148 aa13.09□□□□□ -0.31
Msh3-202ENSMUST00000185852 Nip7Q9CXK8 180 aaKnown RBP13.09□□□□□ -0.31
Msh3-202ENSMUST00000185852 PzpQ61838 1495 aa13.09□□□□□ -0.31
Msh3-202ENSMUST00000185852 Atp10aO54827 1508 aa13.09□□□□□ -0.31
Msh3-202ENSMUST00000185852 Smc5Q8CG46 1101 aaKnown RBP13.09□□□□□ -0.31
Msh3-202ENSMUST00000185852 Mapk8ip1Q9WVI9 707 aa13.09□□□□□ -0.31
Msh3-202ENSMUST00000185852 Elp1Q7TT37 1333 aaKnown RBP13.08□□□□□ -0.31
Msh3-202ENSMUST00000185852 Pnmal2G3X9N3 661 aa13.08□□□□□ -0.31
Msh3-202ENSMUST00000185852 CrklP47941 303 aa13.08□□□□□ -0.31
Msh3-202ENSMUST00000185852 Usp48Q3V0C5 1052 aa13.08□□□□□ -0.31
Msh3-202ENSMUST00000185852 Noc3lQ8VI84 807 aaKnown RBP13.08□□□□□ -0.31
Msh3-202ENSMUST00000185852 Klc3Q91W40 508 aa13.08□□□□□ -0.32
Msh3-202ENSMUST00000185852 ThemisQ8BGW0 636 aa13.08□□□□□ -0.32
Msh3-202ENSMUST00000185852 Cetn4Q8K4K1 168 aa13.08□□□□□ -0.32
Msh3-202ENSMUST00000185852 Lmod3E9QA62 571 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Dnttip2Q8R2M2 758 aaKnown RBP13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 ZgpatQ8VDM1 511 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Rapgef4Q9EQZ6 1011 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Il1rapl2Q9ERS6 686 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Ak9G3UYQ4 1894 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Zkscan2G3X952 960 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Ptpdc1Q6NZK8 747 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Gnl3lQ6PGG6 577 aaKnown RBP13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Kiaa1107Q80TK0 1369 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Rabep1O35551 862 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Polr3gQ6NXY9 223 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Trim34aQ99PP6 485 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Nsfl1cQ9CZ44 370 aaKnown RBP13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Pola1P33609 1465 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Pde3bQ61409 1100 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 GckrQ91X44 587 aa13.07□□□□□ -0.32
Msh3-202ENSMUST00000185852 Sbno1Q689Z5 1390 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Wdr78E9PYY5 807 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Ercc3P49135 783 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Lmbr1lQ9D1E5 489 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Erich6bQ9D4S6 220 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Rlbp1Q9Z275 317 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Uhrf1bp1lA2RSJ4 1457 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Pde4bB1AWC9 736 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Ankrd44B2RXR6 993 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Dnajc2P54103 621 aaKnown RBP13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Erc2Q6PH08 957 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Efcab2Q9CQ46 164 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Liat1Q810M6 228 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 Tbc1d7Q9D0K0 293 aa13.06□□□□□ -0.32
Msh3-202ENSMUST00000185852 LratQ9JI60 231 aa13.05□□□□□ -0.32
Msh3-202ENSMUST00000185852 Wdr17E9Q271 1322 aa13.05□□□□□ -0.32
Msh3-202ENSMUST00000185852 Fbln2P37889 1221 aa13.05□□□□□ -0.32
Msh3-202ENSMUST00000185852 Irf9Q61179 399 aa13.05□□□□□ -0.32
Msh3-202ENSMUST00000185852 Zbtb3Q91X45 518 aa13.05□□□□□ -0.32
Msh3-202ENSMUST00000185852 Scaf11E9PZM7 1456 aaKnown RBP13.05□□□□□ -0.32
Msh3-202ENSMUST00000185852 Slf2Q6P9P0 1278 aa13.05□□□□□ -0.32
Msh3-202ENSMUST00000185852 Miga2Q8BK03 593 aa13.05□□□□□ -0.32
Msh3-202ENSMUST00000185852 Brf1Q8CFK2 676 aa13.05□□□□□ -0.32
Msh3-202ENSMUST00000185852 Ercc6l2Q9JIM3 1537 aa13.04□□□□□ -0.32
Msh3-202ENSMUST00000185852 Ankrd50F7BE84 1390 aa13.04□□□□□ -0.32
Msh3-202ENSMUST00000185852 Hspa2P17156 633 aa13.04□□□□□ -0.32
Msh3-202ENSMUST00000185852 Myd88P22366 296 aa13.04□□□□□ -0.32
Msh3-202ENSMUST00000185852 Fam13aQ8BGI4 693 aa13.04□□□□□ -0.32
Msh3-202ENSMUST00000185852 Mad1l1Q9WTX8 717 aaKnown RBP13.04□□□□□ -0.32
Msh3-202ENSMUST00000185852 IghaA0A0A6YXW6 389 aa13.04□□□□□ -0.32
Msh3-202ENSMUST00000185852 Ptcd1Q8C2E4 695 aaKnown RBP13.04□□□□□ -0.32
Msh3-202ENSMUST00000185852 PaskQ8CEE6 1383 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 Ddx11Q6AXC6 880 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 BccipQ9CWI3 316 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 Zeb2Q9R0G7 1215 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 Atf7ipQ7TT18 1306 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 Washc4Q3UMB9 1173 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 Tomm22Q9CPQ3 142 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 Sos1Q62245 1319 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 Tceanc2Q8R2M0 207 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 Abcc3B2RX12 1523 aa13.03□□□□□ -0.32
Msh3-202ENSMUST00000185852 Casq1O09165 405 aa13.02□□□□□ -0.32
Msh3-202ENSMUST00000185852 Hoxb7P09024 217 aa13.02□□□□□ -0.32
Msh3-202ENSMUST00000185852 Edc3Q8K2D3 508 aaKnown RBP13.02□□□□□ -0.32
Msh3-202ENSMUST00000185852 Tmc1Q8R4P5 757 aa13.02□□□□□ -0.32
Msh3-202ENSMUST00000185852 Nlrp3Q8R4B8 1033 aa13.02□□□□□ -0.33
Msh3-202ENSMUST00000185852 Gigyf1Q99MR1 1044 aaKnown RBP13.02□□□□□ -0.33
Msh3-202ENSMUST00000185852 Amotl1Q9D4H4 968 aa13.02□□□□□ -0.33
Msh3-202ENSMUST00000185852 FancaQ9JL70 1439 aa13.02□□□□□ -0.33
Msh3-202ENSMUST00000185852 NhsB1AV60 1647 aa13.01□□□□□ -0.33
Msh3-202ENSMUST00000185852 Kif20aP97329 887 aa13.01□□□□□ -0.33
Msh3-202ENSMUST00000185852 Cpa2Q504N0 417 aa13.01□□□□□ -0.33
Msh3-202ENSMUST00000185852 Arhgef1Q61210 920 aaKnown RBP13.01□□□□□ -0.33
Msh3-202ENSMUST00000185852 Fam170aQ66LM6 333 aa13.01□□□□□ -0.33
Msh3-202ENSMUST00000185852 Jmjd4Q8BFT6 427 aa13.01□□□□□ -0.33
Msh3-202ENSMUST00000185852 Ccer1Q9CQL2 403 aa13.01□□□□□ -0.33
Msh3-202ENSMUST00000185852 PigbQ9JJQ0 542 aa13.01□□□□□ -0.33
Msh3-202ENSMUST00000185852 Dnajc5P60904 198 aa13□□□□□ -0.33
Msh3-202ENSMUST00000185852 F2rP30558 430 aa13□□□□□ -0.33
Msh3-202ENSMUST00000185852 Rsph3aQ3UFY4 516 aa13□□□□□ -0.33
Msh3-202ENSMUST00000185852 Chd1P40201 1711 aa13□□□□□ -0.33
Msh3-202ENSMUST00000185852 Rnf17Q99MV7 1640 aa13□□□□□ -0.33
Msh3-202ENSMUST00000185852 NmiO35309 314 aa13□□□□□ -0.33
Msh3-202ENSMUST00000185852 Ddb1Q3U1J4 1140 aaKnown RBP13□□□□□ -0.33
Msh3-202ENSMUST00000185852 Trim27Q62158 513 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms