RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 Ints3Q7TPD0 1041 aaKnown RBP12.87□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Dph6Q9CQ28 267 aa12.87□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Ercc6lQ8BHK9 1240 aa12.87□□□□□ -0.35
Col6a4-201ENSMUST00000121963 PtprkP35822 1457 aa12.87□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Usp5P56399 858 aaKnown RBP12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Q9D5Q8 446 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 GancQ8BVW0 898 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Cfap65Q3V0B4 1847 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Anp32eP97822 260 aaKnown RBP12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Ppip5k2Q6ZQB6 1129 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Stk38Q91VJ4 465 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Cavin4A2AMM0 362 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 TchhA0A0B4J1F9 1599 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Qtrt2B8ZXI1 415 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Zkscan2G3X952 960 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Kif4P33174 1231 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Erlin2Q8BFZ9 340 aa12.86□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Pip4k2aO70172 405 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 SlmapQ3URD3 845 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Cdan1Q8CC12 1239 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Serpina10Q8R121 448 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 OvosQ3UU35 1456 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Palm3A2TJV2 734 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 ChgaP26339 463 aaKnown RBP12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Ddb1Q3U1J4 1140 aaKnown RBP12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Glipr1l2Q9CQ35 332 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Smarcad1Q04692 1021 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Ltv1Q6NSQ7 470 aaKnown RBP12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Srgap3Q812A2 1099 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Gimap8Q75N62 688 aa12.85□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Ccdc171E9Q1U1 1324 aa12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Cdkl5Q3UTQ8 938 aa12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 GpkowQ56A08 488 aa12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Nop9Q8BMC4 636 aaKnown RBP12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Rhot2Q8JZN7 620 aa12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 ScribQ80U72 1612 aa12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Nip7Q9CXK8 180 aaKnown RBP12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Ccdc30Q8BVF4 654 aa12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Mipol1Q9D9F8 279 aa12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Hmgn5Q9JL35 406 aa12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Kif16bB1AVY7 1312 aa12.84□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Luc7lQ9CYI4 371 aaKnown RBP12.83□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Ccdc39Q9D5Y1 937 aa12.83□□□□□ -0.35
Col6a4-201ENSMUST00000121963 Ppp1r21Q3TDD9 780 aa12.83□□□□□ -0.36
Col6a4-201ENSMUST00000121963 PalmQ9Z0P4 383 aa12.83□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Dzip1Q8BMD2 852 aa12.83□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Phf23Q8BSN5 401 aa12.83□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Iqca1Q9CUL5 857 aa12.83□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Usp33Q8R5K2 909 aa12.83□□□□□ -0.36
Col6a4-201ENSMUST00000121963 RtcbQ99LF4 505 aaKnown RBP12.83□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Nek4Q9Z1J2 792 aa12.83□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Fsd1Q7TPM6 496 aa12.83□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Ptcd1Q8C2E4 695 aaKnown RBP12.82□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Apaf1O88879 1249 aa12.82□□□□□ -0.36
Col6a4-201ENSMUST00000121963 NapbP28663 298 aa12.82□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Pank1Q8K4K6 548 aa12.82□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Abcd1P48410 736 aa12.82□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Larp1Q6ZQ58 1072 aaKnown RBP12.82□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Gripap1Q8VD04 806 aa12.82□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Eif5P59325 429 aaKnown RBP12.81□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Neo1P97798 1493 aa12.81□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Tom1l2Q5SRX1 507 aa12.81□□□□□ -0.36
Col6a4-201ENSMUST00000121963 AidaQ8C4Q6 305 aa12.81□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Tbc1d7Q9D0K0 293 aa12.81□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Igf1rQ60751 1373 aa12.81□□□□□ -0.36
Col6a4-201ENSMUST00000121963 CastP51125 788 aa12.81□□□□□ -0.36
Col6a4-201ENSMUST00000121963 ImmtQ8CAQ8 757 aaKnown RBP12.81□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Chaf1aQ9QWF0 911 aa12.81□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Kif3cO35066 796 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Eif6O55135 245 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Ccnl1Q52KE7 532 aaKnown RBP12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Bag4Q8CI61 457 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Slc4a8Q8JZR6 1089 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 TimelessQ9R1X4 1197 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Lrrfip1Q3UZ39 729 aaKnown RBP12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Mns1Q61884 491 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 AdnpQ9Z103 1108 aaKnown RBP12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Homer1Q9Z2Y3 366 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Pet2A2AHY8 747 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Dydc2Q9D3X8 139 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 ParvgQ9ERD8 331 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 SafbD3YXK2 937 aaKnown RBP12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Wasf1Q8R5H6 559 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Ddx58Q6Q899 926 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Riok3Q9DBU3 519 aaKnown RBP12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Lmbr1Q9JIT0 490 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Tmem94Q7TSH8 1360 aa12.8□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Ccne1Q61457 408 aa12.79□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Dpp7Q9ET22 506 aa12.79□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Ppip5k1A2ARP1 1436 aa12.79□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Pms1Q8K119 917 aa12.79□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Q9D9S1 216 aa12.79□□□□□ -0.36
Col6a4-201ENSMUST00000121963 TmpoQ61033 693 aaKnown RBP12.79□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Fam13aQ8BGI4 693 aa12.79□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Bcl11aQ9QYE3 773 aa12.79□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Nfxl1E9Q8I7 918 aaKnown RBP12.79□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Elf1Q60775 612 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Adck5Q80V03 582 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 PogzQ8BZH4 1409 aaKnown RBP12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 IbtkQ6ZPR6 1352 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms