RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Ccdc150Q8CDI7 1110 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Cnnm1Q0GA42 951 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Pde4cQ3UEI1 686 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Luzp1Q8R4U7 1068 aaKnown RBP12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Riok1Q922Q2 567 aa12.49□□□□□ -0.41
Vcan-202ENSMUST00000109544 Gm44503E9PYU5 387 aa12.48□□□□□ -0.41
Vcan-202ENSMUST00000109544 Bbof1Q3V079 533 aa12.48□□□□□ -0.41
Vcan-202ENSMUST00000109544 Fnbp4Q6ZQ03 1031 aa12.48□□□□□ -0.41
Vcan-202ENSMUST00000109544 Fam13aQ8BGI4 693 aa12.48□□□□□ -0.41
Vcan-202ENSMUST00000109544 ScribQ80U72 1612 aa12.48□□□□□ -0.41
Vcan-202ENSMUST00000109544 Trim34bJ3QNR8 485 aa12.48□□□□□ -0.41
Vcan-202ENSMUST00000109544 Tacc1Q6Y685 774 aa12.48□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ccdc93Q7TQK5 629 aa12.48□□□□□ -0.41
Vcan-202ENSMUST00000109544 Nf2P46662 596 aa12.47□□□□□ -0.41
Vcan-202ENSMUST00000109544 Znf287Q9EQB9 759 aa12.47□□□□□ -0.41
Vcan-202ENSMUST00000109544 Bms1Q6PGF5 1284 aaKnown RBP12.47□□□□□ -0.41
Vcan-202ENSMUST00000109544 Tubb4bP68372 445 aaKnown RBP12.47□□□□□ -0.41
Vcan-202ENSMUST00000109544 Als2cr12Q8BVM7 383 aa12.47□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ppfibp2O35711 882 aa12.47□□□□□ -0.41
Vcan-202ENSMUST00000109544 Gbp1Q01514 589 aa12.47□□□□□ -0.41
Vcan-202ENSMUST00000109544 Knop1Q9Z2Q2 478 aaKnown RBP12.47□□□□□ -0.41
Vcan-202ENSMUST00000109544 Anapc15-psA0A140T8L6 141 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Bcl2l13P59017 434 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ddx58Q6Q899 926 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Gimap6Q8K349 305 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Sirt1Q923E4 737 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Calml4Q91WQ9 153 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ktn1Q61595 1327 aaKnown RBP12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Rad54l2Q99NG0 1466 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Strn4P58404 760 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Map3k7clP58500 142 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Nucb2P81117 420 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Skor1Q8BX46 964 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Sept6Q9R1T4 434 aa12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 IbtkQ6ZPR6 1352 aaKnown RBP12.46□□□□□ -0.41
Vcan-202ENSMUST00000109544 Ccdc158Q8CDI6 1109 aa12.46□□□□□ -0.42
Vcan-202ENSMUST00000109544 Cdc37l1Q9CZP7 335 aa12.46□□□□□ -0.42
Vcan-202ENSMUST00000109544 Cetn1P41209 172 aa12.46□□□□□ -0.42
Vcan-202ENSMUST00000109544 Mex3cQ05A36 652 aaKnown RBP12.46□□□□□ -0.42
Vcan-202ENSMUST00000109544 Mum1Q6DID5 682 aa12.46□□□□□ -0.42
Vcan-202ENSMUST00000109544 Jph4Q80WT0 628 aa12.46□□□□□ -0.42
Vcan-202ENSMUST00000109544 Tmc2Q8R4P4 888 aa12.46□□□□□ -0.42
Vcan-202ENSMUST00000109544 Cd109Q8R422 1442 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Stx1aO35526 288 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Fam107bQ3TGF2 131 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Gm21680A0A0G2JGR8 267 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Zkscan7E9PVW1 718 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 DesP31001 469 aaKnown RBP12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Eif3j1Q3UGC7 261 aaKnown RBP12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Eif3j2Q66JS6 263 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Themis2Q91YX0 663 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Gm45140A0A0N4SUM8 220 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Gbp8Q2V6D6 525 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 ZwintQ9CQU5 252 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Olr1Q9EQ09 363 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Znf704Q9ERQ3 566 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Igbp1bQ9QZ29 343 aa12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Tax1bp1Q3UKC1 814 aaKnown RBP12.45□□□□□ -0.42
Vcan-202ENSMUST00000109544 Ctr9Q62018 1173 aaKnown RBP12.44□□□□□ -0.42
Vcan-202ENSMUST00000109544 Sass6Q80UK7 654 aa12.44□□□□□ -0.42
Vcan-202ENSMUST00000109544 Shtn1Q8K2Q9 631 aa12.44□□□□□ -0.42
Vcan-202ENSMUST00000109544 AidaQ8C4Q6 305 aa12.44□□□□□ -0.42
Vcan-202ENSMUST00000109544 IkQ9Z1M8 557 aaKnown RBP12.44□□□□□ -0.42
Vcan-202ENSMUST00000109544 Homer1Q9Z2Y3 366 aa12.44□□□□□ -0.42
Vcan-202ENSMUST00000109544 Erich4Q3UNU4 136 aa12.44□□□□□ -0.42
Vcan-202ENSMUST00000109544 Apaf1O88879 1249 aa12.44□□□□□ -0.42
Vcan-202ENSMUST00000109544 Atf3Q60765 181 aa12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Iffo1Q8BXL9 562 aa12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Aldh1l1Q8R0Y6 902 aa12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Rnf34Q99KR6 376 aa12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Snw1Q9CSN1 536 aaKnown RBP12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Fkbp4P30416 458 aa12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Map4k4P97820 1233 aaKnown RBP12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Gas2l3Q3UWW6 683 aa12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Tfip11Q9ERA6 838 aaKnown RBP12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Rad23bP54728 416 aa12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Spty2d1Q68FG3 682 aa12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 4921504E06RikQ8CET2 560 aa12.43□□□□□ -0.42
Vcan-202ENSMUST00000109544 Gjb2Q00977 226 aa12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 Smc5Q8CG46 1101 aaKnown RBP12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 Kif2aP28740 705 aa12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 Flad1Q8R123 492 aa12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 Ehbp1Q69ZW3 1231 aa12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 IqcgQ80W32 419 aa12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 Soga1E1U8D0 1418 aa12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 Ampd3O08739 766 aa12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 Limch1Q3UH68 1057 aa12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 Zranb3Q6NZP1 1069 aa12.42□□□□□ -0.42
Vcan-202ENSMUST00000109544 Wdr63B2RY71 923 aa12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 Smarcc1P97496 1104 aa12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 TkfcQ8VC30 578 aa12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 Ddx23D3Z0M9 819 aaKnown RBP12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 Cdca8Q8BHX3 289 aa12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 Rbm5Q91YE7 815 aaKnown RBP12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 Smarca2Q6DIC0 1577 aa12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 Cep135Q6P5D4 1140 aa12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 Txndc16Q7TN22 820 aa12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 Cc2d1bQ8BRN9 848 aa12.41□□□□□ -0.42
Vcan-202ENSMUST00000109544 Ppp1r9bQ6R891 817 aaKnown RBP12.4□□□□□ -0.42
Vcan-202ENSMUST00000109544 Synj1Q8CHC4 1574 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms