RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Trim29Q8R2Q0 587 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Tubb4aQ9D6F9 444 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Prpf4bQ61136 1007 aaKnown RBP12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Srgap3Q812A2 1099 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Smc4Q8CG47 1286 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Atxn3Q9CVD2 355 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Cdc37l1Q9CZP7 335 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Zkscan5Q9Z1D8 819 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Ccdc191J3QQ27 883 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Ccdc93Q7TQK5 629 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gys2Q8VCB3 704 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Kri1Q8VDQ9 704 aaKnown RBP12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Cd109Q8R422 1442 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 EvcP57680 1005 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Pafah1b1P63005 410 aaKnown RBP12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Sytl4Q9R0Q1 673 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Stx1aO35526 288 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Abcd1P48410 736 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Smarcc1P97496 1104 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 TxlnbQ8VBT1 685 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Ccdc39Q9D5Y1 937 aa12□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gm10471E9Q1C7 252 aa11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Sparcl1P70663 650 aa11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gtf2f1Q3THK3 508 aaKnown RBP11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Secisbp2lQ6A098 1086 aaKnown RBP11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Polr1aO35134 1717 aaKnown RBP11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Pip4k2aO70172 405 aa11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Bbof1Q3V079 533 aa11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Snx13Q6PHS6 957 aa11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Cwc27Q3TKY6 469 aa11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Rprd2Q6NXI6 1469 aaKnown RBP11.99□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gsto1O09131 240 aa11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gm21671G3UY31 267 aa11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 Nf2P46662 596 aa11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 Erlin2Q8BFZ9 340 aa11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 LlphQ9D945 130 aaKnown RBP11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 Cfap45Q9D9U9 551 aa11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 Fgd6Q69ZL1 1399 aa11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 Fam76aQ922G2 307 aa11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 Cdc45Q9Z1X9 566 aa11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 Fchsd2Q3USJ8 740 aa11.98□□□□□ -0.49
Lig4-201ENSMUST00000095476 Erlin1Q91X78 346 aa11.97□□□□□ -0.49
Lig4-201ENSMUST00000095476 Il16O54824 1322 aa11.97□□□□□ -0.49
Lig4-201ENSMUST00000095476 Pde1cQ64338 706 aa11.97□□□□□ -0.49
Lig4-201ENSMUST00000095476 Smarca5Q91ZW3 1051 aaKnown RBP11.97□□□□□ -0.49
Lig4-201ENSMUST00000095476 NrkQ9R0G8 1455 aa11.97□□□□□ -0.49
Lig4-201ENSMUST00000095476 Ranbp1P34022 203 aaKnown RBP11.97□□□□□ -0.49
Lig4-201ENSMUST00000095476 Erich4Q3UNU4 136 aa11.97□□□□□ -0.49
Lig4-201ENSMUST00000095476 Luzp1Q8R4U7 1068 aaKnown RBP11.97□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gm7298A0A0N4SVU1 1476 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gng11P61953 73 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Hdgfl1Q2VPR5 283 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Pde4cQ3UEI1 686 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Ccdc66Q6NS45 935 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Dhx30Q99PU8 1217 aaKnown RBP11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Zmym3Q9JLM4 1370 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Psme1P97371 249 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Ercc6lQ8BHK9 1240 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Mrps27Q8BK72 415 aaKnown RBP11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Cabp4Q8VHC5 271 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Ankrd1Q9CR42 319 aa11.96□□□□□ -0.49
Lig4-201ENSMUST00000095476 Sox12Q04890 314 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Mex3cQ05A36 652 aaKnown RBP11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Larp1Q6ZQ58 1072 aaKnown RBP11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Tango6Q8C3S2 1079 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 ZwintQ9CQU5 252 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Golga5Q9QYE6 729 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Gadd45bP22339 160 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ccdc162pQ0VG85 912 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Shq1Q7TMX5 569 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ano10Q8BH79 659 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 ClasrpQ8CFC7 668 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Rbm33Q9CXK9 1231 aaKnown RBP11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Stxbp4Q9WV89 557 aa11.96□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ptgs1P22437 602 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Clul1Q3ZRW6 464 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Scaf1Q5U4C3 1256 aaKnown RBP11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Plekhm2Q80TQ5 1018 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Luc7lQ9CYI4 371 aaKnown RBP11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Mnat1P51949 309 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Crocc2F6XLV1 1638 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Brd1E9PZ26 1189 aaKnown RBP11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Oas2E9Q9A9 742 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Fsd1Q7TPM6 496 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Odf2lQ9D478 642 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Polr3aB2RXC6 1390 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Als2cr12Q8BVM7 383 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Slc13a4Q8BZ82 625 aa11.95□□□□□ -0.5
Lig4-201ENSMUST00000095476 Mphosph10Q810V0 681 aaKnown RBP11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 Rhot2Q8JZN7 620 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 Syt10Q9R0N4 523 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 Rps6ka5Q8C050 863 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 Calcoco1Q8CGU1 691 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ddx58Q6Q899 926 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 Tmc2Q8R4P4 888 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 IncenpQ9WU62 880 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 A2mQ6GQT1 1474 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 March6Q6ZQ89 909 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 Ccdc186Q8C9S4 917 aa11.94□□□□□ -0.5
Lig4-201ENSMUST00000095476 Sos1Q62245 1319 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 74.2 ms