RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Brpf1B2RRD7 1212 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Vamp4O70480 141 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Znf326O88291 580 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Nphp1Q9QY53 687 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Cyp46a1Q9WVK8 500 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Elp1Q7TT37 1333 aaKnown RBP12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Slc5a1Q8C3K6 665 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Ttc41Q692V3 1318 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Ankrd44B2RXR6 993 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 DekQ7TNV0 380 aaKnown RBP12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 NexnQ7TPW1 607 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Klhdc4Q921I2 584 aa12.8□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Rreb1Q3UH06 1700 aaKnown RBP12.79□□□□□ -0.36
Ldb3-205ENSMUST00000090040 MecomP14404 1042 aa12.79□□□□□ -0.36
Ldb3-205ENSMUST00000090040 OptnQ8K3K8 584 aa12.79□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Chpf2Q3UU43 768 aa12.79□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Erbb3Q61526 1339 aa12.79□□□□□ -0.36
Ldb3-205ENSMUST00000090040 PtmsQ9D0J8 101 aaKnown RBP12.79□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Kdm6aO70546 1401 aa12.79□□□□□ -0.36
Ldb3-205ENSMUST00000090040 AppP12023 770 aa12.79□□□□□ -0.36
Ldb3-205ENSMUST00000090040 FancaQ9JL70 1439 aa12.78□□□□□ -0.36
Ldb3-205ENSMUST00000090040 P2rx7Q9Z1M0 595 aa12.78□□□□□ -0.36
Ldb3-205ENSMUST00000090040 ScaperF8VQ70 1398 aaKnown RBP12.78□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Nckap5lQ6GQX2 1323 aa12.78□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Gas2l2Q5SSG4 860 aa12.78□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Ano8Q6PB70 1060 aa12.77□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Cdk12Q14AX6 1484 aaKnown RBP12.77□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Tom1O88746 492 aa12.77□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Q8C5K5 320 aa12.77□□□□□ -0.37
Ldb3-205ENSMUST00000090040 CemipQ8BI06 1361 aa12.77□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Erc2Q6PH08 957 aa12.77□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Pes1Q9EQ61 584 aaKnown RBP12.77□□□□□ -0.37
Ldb3-205ENSMUST00000090040 CarsQ9ER72 831 aaKnown RBP12.77□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Exoc6bA6H5Z3 810 aa12.77□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Card10P58660 1021 aa12.77□□□□□ -0.37
Ldb3-205ENSMUST00000090040 ApobrQ8VBT6 942 aa12.77□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Dip2bQ3UH60 1574 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Rabep1O35551 862 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Smarce1O54941 411 aaKnown RBP12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Stard3nlQ9DCI3 235 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Sh3bp5Q9Z131 463 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Zkscan2G3X952 960 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Srgap3Q812A2 1099 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Tmem2Q5FWI3 1383 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Ncapd2Q8K2Z4 1392 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 CrklP47941 303 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Ccdc155Q80VJ8 648 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Q4VA45 678 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 ThemisQ8BGW0 636 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Kif18aQ91WD7 886 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Slc5a4bQ91ZP4 660 aa12.76□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Plcb2A3KGF7 1181 aa12.75□□□□□ -0.37
Ldb3-205ENSMUST00000090040 ChgaP26339 463 aaKnown RBP12.75□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Prkar2bP31324 416 aa12.75□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Cwc27Q3TKY6 469 aa12.75□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Q9D2X8 372 aa12.75□□□□□ -0.37
Ldb3-205ENSMUST00000090040 4930407I10RikD3Z5T8 1512 aa12.75□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Duxf3A0A0N4SV92 674 aa12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Slc35g1Q8BY79 368 aa12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Cdk5rap2Q8K389 1822 aa12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Nek4Q9Z1J2 792 aa12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Mum1Q6DID5 682 aa12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Eif2s2Q99L45 331 aaKnown RBP12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Echdc1Q9D9V3 322 aa12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Nrxn1Q9CS84 1514 aa12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Cers3Q1A3B0 383 aa12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Rassf8Q8CJ96 419 aa12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Zc3h13E9Q784 1729 aaKnown RBP12.74□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Prim1P20664 417 aa12.73□□□□□ -0.37
Ldb3-205ENSMUST00000090040 PtmaP26350 111 aa12.73□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Atp6v1dP57746 247 aa12.73□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Hmox1P14901 289 aa12.73□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Slit3Q9WVB4 1523 aa12.73□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Taf7Q9R1C0 341 aa12.72□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Irf9Q61179 399 aa12.71□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Cog6Q8R3I3 657 aa12.71□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Nsd3Q6P2L6 1439 aa12.71□□□□□ -0.37
Ldb3-205ENSMUST00000090040 Bcl9Q9D219 1425 aa12.71□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Rims2Q9EQZ7 1530 aa12.71□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Aldh1l2Q8K009 923 aa12.7□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Neurod6P48986 337 aa12.7□□□□□ -0.38
Ldb3-205ENSMUST00000090040 VgfQ0VGU4 617 aa12.7□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Exoc5Q3TPX4 708 aa12.7□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Map3k13Q1HKZ5 959 aa12.7□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Fam83gQ5SWY7 812 aa12.7□□□□□ -0.38
Ldb3-205ENSMUST00000090040 PplQ9R269 1755 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Ddx11Q6AXC6 880 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Jmjd4Q8BFT6 427 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 GckrQ91X44 587 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Kif24Q6NWW5 1356 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Mre11Q61216 706 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Cps1Q8C196 1500 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Pde4dQ01063 747 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Aplp1Q03157 653 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Fkbp5Q64378 456 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Ppp1r42Q8R1Z4 357 aa12.69□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Ankle2Q6P1H6 964 aa12.68□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Ddx58Q6Q899 926 aa12.68□□□□□ -0.38
Ldb3-205ENSMUST00000090040 Kdm2bQ6P1G2 1309 aa12.68□□□□□ -0.38
Ldb3-205ENSMUST00000090040 PhaxQ9JJT9 385 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 1255.5 ms