RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Zeb2Q9R0G7 1215 aa19.56■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Stim1P70302 685 aa19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Bag1Q60739 355 aa19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Rrs1Q9CYH6 365 aaKnown RBP19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Ccne1Q61457 408 aa19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Rufy2Q8R4C2 606 aa19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Cyp26c1B2RXA7 518 aa19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Gm10563F6WIE4 79 aa19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Pof1bQ8K4L4 587 aa19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 ScaperF8VQ70 1398 aaKnown RBP19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Lamc3Q9R0B6 1581 aa19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Samm50Q8BGH2 469 aa19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Rrp9Q91WM3 475 aaKnown RBP19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 NgdnQ9DB96 315 aaKnown RBP19.55■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 AidaQ8C4Q6 305 aa19.54■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 NinlQ6ZQ12 1394 aa19.54■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Gjb2Q00977 226 aa19.54■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Nat10Q8K224 1024 aaKnown RBP19.54■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 PrkcshO08795 521 aa19.54■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Eif5P59325 429 aaKnown RBP19.54■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Pde4bB1AWC9 736 aa19.53■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Fam135aQ6NS59 1506 aa19.53■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Syce3B5KM66 88 aa19.53■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Cpa2Q504N0 417 aa19.53■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Cep89Q9CZX2 791 aa19.53■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Cfap69Q8BH53 942 aa19.52■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Nlrp3Q8R4B8 1033 aa19.52■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Ccdc96Q9CR92 584 aa19.52■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Znf704Q9ERQ3 566 aa19.52■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 CastP51125 788 aa19.52■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Kif20aP97329 887 aa19.52■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Fam13bQ8K2H3 851 aa19.52■□□□□ 0.72
Ubfd1-201ENSMUST00000033158 Idi2Q8BFZ6 227 aa19.52■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Riok1Q922Q2 567 aa19.52■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 IkQ9Z1M8 557 aaKnown RBP19.51■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Pik3c2gO70167 1506 aa19.51■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 OvosQ3UU35 1456 aa19.51■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 GpkowQ56A08 488 aa19.51■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 BicraF8VPZ9 1578 aa19.51■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Cep112Q5PR68 954 aa19.51■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Ncbp3Q8BZR9 615 aaKnown RBP19.51■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Wasf1Q8R5H6 559 aa19.51■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Hdgfl1Q2VPR5 283 aa19.5■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Lmbr1Q9JIT0 490 aa19.5■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Cep131Q62036 1060 aa19.5■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Ercc6lQ8BHK9 1240 aa19.5■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Rbm10Q99KG3 930 aaKnown RBP19.5■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Atp10dQ8K2X1 1416 aa19.5■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Ncbp1Q3UYV9 790 aaKnown RBP19.5■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 RalgapbQ8BQZ4 1484 aa19.5■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Dusp9Q7TNL7 452 aa19.49■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Phldb2Q8K1N2 1249 aa19.49■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Slc13a4Q8BZ82 625 aa19.49■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Luc7lQ9CYI4 371 aaKnown RBP19.49■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Bag3Q9JLV1 577 aaKnown RBP19.49■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Larp1Q6ZQ58 1072 aaKnown RBP19.48■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Paf1Q8K2T8 535 aa19.48■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Lamb3Q61087 1168 aa19.48■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 CenpqQ9CPQ5 267 aa19.48■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Cfap45Q9D9U9 551 aa19.48■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Kank1E9Q238 1360 aa19.48■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Pknox2Q8BG99 474 aa19.47■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Slc5a1Q8C3K6 665 aa19.47■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Abcd1P48410 736 aa19.47■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 GnpatP98192 678 aa19.47■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Gas2l3Q3UWW6 683 aa19.47■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Ppp1r9bQ6R891 817 aaKnown RBP19.47■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Ankrd44B2RXR6 993 aa19.46■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Mcm4P49717 862 aa19.46■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Ddx19aQ61655 478 aaKnown RBP19.46■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Ccdc39Q9D5Y1 937 aa19.46■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Phlpp2Q8BXA7 1320 aa19.46■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Uspl1Q3ULM6 1089 aa19.46■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Cwc15Q9JHS9 229 aaKnown RBP19.46■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Chaf1aQ9QWF0 911 aa19.46■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Bcar3Q9QZK2 820 aa19.46■□□□□ 0.71
Ubfd1-201ENSMUST00000033158 Cavin1O54724 392 aa19.45■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Iqca1Q9CUL5 857 aa19.45■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Wdr33Q8K4P0 1330 aaKnown RBP19.45■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Tnni2P13412 182 aa19.45■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Ddx58Q6Q899 926 aa19.45■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Soga3Q6NZL0 945 aa19.45■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 ZwintQ9CQU5 252 aa19.45■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 ImpactO55091 318 aa19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Tbc1d9Q3UYK3 1264 aa19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 AI481877A2ALV5 1481 aa19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Elp1Q7TT37 1333 aaKnown RBP19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Anapc15-psA0A140T8L6 141 aa19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Nol11Q8BJW5 723 aaKnown RBP19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Cep55Q8BT07 462 aa19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Dnaaf4Q8R368 420 aa19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 SrrtQ99MR6 875 aaKnown RBP19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Chpf2Q3UU43 768 aa19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Mcm10Q0VBD2 885 aa19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 EappQ5BU09 281 aa19.44■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Bicdl1A0JNT9 577 aa19.43■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Ccdc155Q80VJ8 648 aa19.43■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Dctn1O08788 1281 aa19.43■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Ccdc102aQ3TMW1 549 aa19.43■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Tmem67Q8BR76 992 aa19.43■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms