RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Pdzd9Q9D9M4 266 aa15.25■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Sos2Q02384 1333 aa15.24■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Gsdma3Q5Y4Y6 464 aa15.24■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Ints5Q8CHT3 1018 aa15.24■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Amotl1Q9D4H4 968 aa15.24■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Snap23O09044 210 aa15.23■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Ezh2Q61188 746 aaKnown RBP15.23■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Exoc6Q8R313 802 aa15.23■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 ApobrQ8VBT6 942 aa15.23■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Gm21663A0A0G2JE01 267 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Gm7361D3Z6R1 267 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 5031410I06RikE9Q4E0 267 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Gm1979E9QAN3 267 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Gm5862K7N5V5 267 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Gm10220K7N660 267 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Q4VA45 678 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Pim2Q62070 370 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Eif3bQ8JZQ9 803 aaKnown RBP15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Ssfa2Q922B9 1252 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Rps6ka4Q9Z2B9 773 aa15.22■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Ccnl1Q52KE7 532 aaKnown RBP15.21■□□□□ 0.03
Ccdc28b-201ENSMUST00000030586 Kdm2bQ6P1G2 1309 aa15.2■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Nsd3Q6P2L6 1439 aa15.2■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Zfp777B9EKF4 885 aa15.2■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Slc5a1Q8C3K6 665 aa15.2■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Cabp2Q9JLK4 216 aa15.2■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Shank3Q4ACU6 1730 aa15.2■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Crb1Q8VHS2 1405 aa15.19■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 TmpoQ61033 693 aaKnown RBP15.19■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Kiaa0319lQ8K135 1048 aa15.19■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Stk31Q99MW1 1018 aa15.19■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 PappaQ8R4K8 1624 aa15.18■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Phf23Q8BSN5 401 aa15.18■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Atf7ipQ7TT18 1306 aa15.17■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Spef2Q8C9J3 1734 aa15.17■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Apaf1O88879 1249 aa15.17■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Fchsd2Q3USJ8 740 aa15.17■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Anp32bQ9EST5 272 aaKnown RBP15.17■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Klc3Q91W40 508 aa15.15■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Hdac6Q9Z2V5 1149 aa15.15■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 VirmaA2AIV2 1811 aaKnown RBP15.15■□□□□ 0.02
Ccdc28b-201ENSMUST00000030586 Abca3Q8R420 1704 aa15.14■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Ccdc155Q80VJ8 648 aa15.14■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Q8BT18 775 aa15.14■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Rab11fip3Q8CHD8 1047 aa15.14■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Chmp7Q8R1T1 451 aa15.14■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Ciz1Q8VEH2 845 aa15.14■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Atg3Q9CPX6 314 aa15.14■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Ankrd13dQ6PD24 605 aa15.13■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Sall2Q9QX96 1004 aa15.13■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Tjp1P39447 1745 aaKnown RBP15.12■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Fam198bQ3UPI1 517 aa15.12■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Cap2Q9CYT6 476 aa15.12■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Trpm3Q5F4S9 1721 aa15.12■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Esx1O88933 382 aa15.1■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Kif23E9Q5G3 953 aa15.09■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Ccdc85cE9Q6B2 420 aa15.09■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Akt1s1Q9D1F4 257 aa15.09■□□□□ 0.01
Ccdc28b-201ENSMUST00000030586 Bicdl1A0JNT9 577 aa15.08■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Dcaf5Q80T85 946 aa15.08■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Iqcf3Q9D498 203 aa15.08■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Abcc12Q80WJ6 1366 aa15.08■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Zscan21Q07231 555 aa15.07■□□□□ 0
Ccdc28b-201ENSMUST00000030586 PsdQ5DTT2 1024 aa15.07■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Mrs2Q5NCE8 434 aa15.07■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Igsf1Q7TQA1 1317 aa15.07■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Znf541Q0GGX2 1363 aa15.07■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Prim1P20664 417 aa15.06■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Map4k4P97820 1233 aaKnown RBP15.06■□□□□ 0
Ccdc28b-201ENSMUST00000030586 CoblQ5NBX1 1337 aaKnown RBP15.06■□□□□ 0
Ccdc28b-201ENSMUST00000030586 Golga2Q921M4 999 aa15.05■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Sos1Q62245 1319 aa15.05■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Usp19Q3UJD6 1360 aa15.05■□□□□ -0
Ccdc28b-201ENSMUST00000030586 AceP09470 1312 aa15.04■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Mapk8ip3Q9ESN9 1337 aa15.04■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Gm13023A2A8N2 498 aa15.04■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Slc4a2P13808 1237 aaKnown RBP15.04■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Jmjd4Q8BFT6 427 aa15.04■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Ubr2Q6WKZ8 1755 aa15.03■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Uspl1Q3ULM6 1089 aa15.03■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Miga2Q8BK03 593 aa15.03■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Efcab2Q9CQ46 164 aa15.03■□□□□ -0
Ccdc28b-201ENSMUST00000030586 PigbQ9JJQ0 542 aa15.03■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Msh6P54276 1358 aaKnown RBP15.02■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Cavin4A2AMM0 362 aa15.02■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Rtf1A2AQ19 715 aaKnown RBP15.02■□□□□ -0
Ccdc28b-201ENSMUST00000030586 Dusp27Q148W8 1138 aa15.02■□□□□ -0
Ccdc28b-201ENSMUST00000030586 AtrnQ9WU60 1428 aa15.01□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Ggnbp2Q5SV77 696 aa15.01□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Clcn1Q64347 994 aa15.01□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Emilin1Q99K41 1017 aa15.01□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Syde2E9PUP1 1314 aa15□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 MeiocA2AG06 965 aa15□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Smg7Q5RJH6 1138 aaKnown RBP15□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Btbd11Q6GQW0 1109 aa15□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Smarcc1P97496 1104 aa14.99□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Slfnl1Q8BHW9 410 aa14.99□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Swt1Q9DBQ9 907 aa14.99□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Uhrf1bp1B2KF50 1429 aa14.99□□□□□ -0.01
Ccdc28b-201ENSMUST00000030586 Cyp2d12Q8BVD2 504 aa14.98□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms