RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Mad1l1Q9WTX8 717 aaKnown RBP12.78□□□□□ -0.36
Ciita-201ENSMUST00000023147 Agtpbp1Q641K1 1218 aa12.78□□□□□ -0.36
Ciita-201ENSMUST00000023147 Med4Q9CQA5 270 aa12.78□□□□□ -0.36
Ciita-201ENSMUST00000023147 Rbm5Q91YE7 815 aaKnown RBP12.77□□□□□ -0.36
Ciita-201ENSMUST00000023147 TxlnbQ8VBT1 685 aa12.77□□□□□ -0.36
Ciita-201ENSMUST00000023147 Sv2bQ8BG39 683 aa12.77□□□□□ -0.37
Ciita-201ENSMUST00000023147 Rrbp1Q99PL5 1605 aaKnown RBP12.77□□□□□ -0.37
Ciita-201ENSMUST00000023147 Slc13a4Q8BZ82 625 aa12.77□□□□□ -0.37
Ciita-201ENSMUST00000023147 Sirt1Q923E4 737 aa12.77□□□□□ -0.37
Ciita-201ENSMUST00000023147 SelenooQ9DBC0 667 aa12.77□□□□□ -0.37
Ciita-201ENSMUST00000023147 SphkapQ6NSW3 1687 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 Ehmt1Q5DW34 1296 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 Arhgef18Q6P9R4 1021 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 Olfml1Q8BSH2 233 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 Spata24Q6P926 205 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 OvosQ3UU35 1456 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 BcanQ61361 883 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 Atxn3Q9CVD2 355 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 Mast1Q9R1L5 1570 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 CastP51125 788 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 Bag4Q8CI61 457 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 Fam13bQ8K2H3 851 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 AnkarA2RT91 1465 aa12.76□□□□□ -0.37
Ciita-201ENSMUST00000023147 Gnai2P08752 355 aaKnown RBP12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Nphp1Q9QY53 687 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Atp2b2Q9R0K7 1198 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Stim1P70302 685 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Cep112Q5PR68 954 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Abl1P00520 1123 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Tango6Q8C3S2 1079 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Tubb6Q922F4 447 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Sall3Q62255 1320 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Nap1l2P51860 460 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Tex2Q6ZPJ0 1128 aaKnown RBP12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Ccar2Q8VDP4 922 aaKnown RBP12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Sel1lQ9Z2G6 790 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Abcc6Q9R1S7 1498 aa12.75□□□□□ -0.37
Ciita-201ENSMUST00000023147 Abca16E9PWJ7 1678 aa12.74□□□□□ -0.37
Ciita-201ENSMUST00000023147 Wdr63B2RY71 923 aa12.74□□□□□ -0.37
Ciita-201ENSMUST00000023147 Nat10Q8K224 1024 aaKnown RBP12.74□□□□□ -0.37
Ciita-201ENSMUST00000023147 Q9D9H8 365 aa12.74□□□□□ -0.37
Ciita-201ENSMUST00000023147 Mipol1Q9D9F8 279 aa12.74□□□□□ -0.37
Ciita-201ENSMUST00000023147 Catsper2A2ARP9 588 aa12.74□□□□□ -0.37
Ciita-201ENSMUST00000023147 Rcan3Q9JKK0 239 aa12.74□□□□□ -0.37
Ciita-201ENSMUST00000023147 Kdm6bQ5NCY0 1641 aa12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 Gm16486A0A1D5RMD1 1434 aa12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 FosbP13346 338 aa12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 Kcna4Q61423 654 aa12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 Tbc1d9Q3UYK3 1264 aa12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 4931400O07RikQ9D4M5 137 aa12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 InsrP15208 1372 aa12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 LifrP42703 1092 aa12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 Ddx19aQ61655 478 aaKnown RBP12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 Plekhm2Q80TQ5 1018 aa12.73□□□□□ -0.37
Ciita-201ENSMUST00000023147 Pola1P33609 1465 aa12.72□□□□□ -0.37
Ciita-201ENSMUST00000023147 Syce3B5KM66 88 aa12.72□□□□□ -0.37
Ciita-201ENSMUST00000023147 Usp48Q3V0C5 1052 aa12.72□□□□□ -0.37
Ciita-201ENSMUST00000023147 TxlnaQ6PAM1 554 aaKnown RBP12.72□□□□□ -0.37
Ciita-201ENSMUST00000023147 NefhP19246 1090 aa12.72□□□□□ -0.37
Ciita-201ENSMUST00000023147 Eif4g3Q80XI3 1579 aaKnown RBP12.72□□□□□ -0.37
Ciita-201ENSMUST00000023147 Phldb2Q8K1N2 1249 aa12.72□□□□□ -0.37
Ciita-201ENSMUST00000023147 Ncbp1Q3UYV9 790 aaKnown RBP12.72□□□□□ -0.37
Ciita-201ENSMUST00000023147 TatQ8QZR1 454 aa12.72□□□□□ -0.37
Ciita-201ENSMUST00000023147 Zpr1Q62384 459 aa12.71□□□□□ -0.37
Ciita-201ENSMUST00000023147 Kdm5cP41230 1554 aa12.71□□□□□ -0.37
Ciita-201ENSMUST00000023147 Ankrd44B2RXR6 993 aa12.71□□□□□ -0.37
Ciita-201ENSMUST00000023147 Fam43aQ8BUP8 424 aa12.71□□□□□ -0.37
Ciita-201ENSMUST00000023147 Klf15Q9EPW2 415 aa12.71□□□□□ -0.37
Ciita-201ENSMUST00000023147 IkQ9Z1M8 557 aaKnown RBP12.71□□□□□ -0.37
Ciita-201ENSMUST00000023147 Rusc2Q80U22 1514 aa12.71□□□□□ -0.37
Ciita-201ENSMUST00000023147 Stk38Q91VJ4 465 aa12.71□□□□□ -0.37
Ciita-201ENSMUST00000023147 Brd1E9PZ26 1189 aaKnown RBP12.71□□□□□ -0.38
Ciita-201ENSMUST00000023147 Hvcn1Q3U2S8 269 aa12.71□□□□□ -0.38
Ciita-201ENSMUST00000023147 Afap1Q80YS6 731 aa12.71□□□□□ -0.38
Ciita-201ENSMUST00000023147 Nol7Q9D7Z3 254 aaKnown RBP12.71□□□□□ -0.38
Ciita-201ENSMUST00000023147 PalmQ9Z0P4 383 aa12.71□□□□□ -0.38
Ciita-201ENSMUST00000023147 Atf3Q60765 181 aa12.7□□□□□ -0.38
Ciita-201ENSMUST00000023147 TbcaP48428 108 aaKnown RBP12.7□□□□□ -0.38
Ciita-201ENSMUST00000023147 Erich4Q3UNU4 136 aa12.7□□□□□ -0.38
Ciita-201ENSMUST00000023147 Fam208aQ69ZR9 1610 aaKnown RBP12.7□□□□□ -0.38
Ciita-201ENSMUST00000023147 Ppp1r15aP17564 657 aa12.7□□□□□ -0.38
Ciita-201ENSMUST00000023147 Znf771Q8BJ90 317 aa12.7□□□□□ -0.38
Ciita-201ENSMUST00000023147 Cetn2Q9R1K9 172 aa12.7□□□□□ -0.38
Ciita-201ENSMUST00000023147 Ncapd2Q8K2Z4 1392 aa12.7□□□□□ -0.38
Ciita-201ENSMUST00000023147 Kif14L0N7N1 1674 aaKnown RBP12.7□□□□□ -0.38
Ciita-201ENSMUST00000023147 Gapvd1Q6PAR5 1458 aa12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Eif3aP23116 1344 aaKnown RBP12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Gm45140A0A0N4SUM8 220 aa12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Smg7Q5RJH6 1138 aaKnown RBP12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Larp1Q6ZQ58 1072 aaKnown RBP12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Ythdc2B2RR83 1445 aaKnown RBP12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Lrrfip2Q91WK0 415 aa12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Erc1Q99MI1 1120 aa12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Q9D9S1 216 aa12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 CenphQ9QYM8 241 aa12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Rasa1E9PYG6 1038 aa12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Stk11ipQ3TAA7 1072 aa12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Sf3b2Q3UJB0 878 aaKnown RBP12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 IbspQ61711 324 aa12.69□□□□□ -0.38
Ciita-201ENSMUST00000023147 Abcc1O35379 1528 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms