RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Bcl11aQ9QYE3 773 aa9.76□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Fnbp4Q6ZQ03 1031 aa9.76□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Nol7Q9D7Z3 254 aaKnown RBP9.76□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Stk3Q9JI10 497 aa9.76□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Fam50bQ9WTJ8 334 aa9.76□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Kcnj4P52189 445 aa9.76□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Ccdc30Q8BVF4 654 aa9.76□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Lrrfip2Q91WK0 415 aa9.76□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Arhgef18Q6P9R4 1021 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Klc3Q91W40 508 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Znf704Q9ERQ3 566 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Zfyve16Q80U44 1528 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 ArsiQ32KI9 573 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Cdkn1cP49919 348 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Tango6Q8C3S2 1079 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Slain2Q8CI08 581 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Olr1Q9EQ09 363 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Cavin4A2AMM0 362 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Znf287Q9EQB9 759 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Prrc2bQ7TPM1 1486 aaKnown RBP9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Asxl1P59598 1514 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Ak7Q9D2H2 614 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Ppip5k1A2ARP1 1436 aa9.75□□□□□ -0.85
Ssr1-201ENSMUST00000021864 PtprgQ05909 1442 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Gsdma2Q32M21 443 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Stk38Q91VJ4 465 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Adcy10Q8C0T9 1614 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Lmbr1Q9JIT0 490 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 PogkQ80TC5 607 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Naip7Q9JIB3 1402 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Frmpd2A0A140LI67 1392 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Vps37dQ810I0 261 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Slc13a4Q8BZ82 625 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Polr3aB2RXC6 1390 aa9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 CalrP14211 416 aaKnown RBP9.74□□□□□ -0.85
Ssr1-201ENSMUST00000021864 PzpQ61838 1495 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Zscan20B2KFW1 1030 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Cadps2Q8BYR5 1297 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Wasf1Q8R5H6 559 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Esx1O88933 382 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Gcc1Q9D4H2 778 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 1700010I14RikQ7TPG0 532 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Tmco3Q8BH01 678 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Q9D9S1 216 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Stxbp4Q9WV89 557 aa9.73□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Nat10Q8K224 1024 aaKnown RBP9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Ipo4Q8VI75 1082 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Bag1Q60739 355 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Mipol1Q9D9F8 279 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Arhgef11Q68FM7 1552 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 CenpqQ9CPQ5 267 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Rab3gap2Q8BMG7 1366 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Asxl2Q8BZ32 1370 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Abca16E9PWJ7 1678 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Adck5Q80V03 582 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Bicdl1A0JNT9 577 aa9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Nop14Q8R3N1 860 aaKnown RBP9.72□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Abcd1P48410 736 aa9.71□□□□□ -0.85
Ssr1-201ENSMUST00000021864 TxlnaQ6PAM1 554 aaKnown RBP9.71□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Ppp2r1aQ76MZ3 589 aa9.71□□□□□ -0.85
Ssr1-201ENSMUST00000021864 ScaperF8VQ70 1398 aaKnown RBP9.71□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Arhgef40Q3UPH7 1517 aa9.71□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Cetn2Q9R1K9 172 aa9.71□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Map9Q3TRR0 646 aa9.71□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Nek4Q9Z1J2 792 aa9.71□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Prpf4bQ61136 1007 aaKnown RBP9.71□□□□□ -0.85
Ssr1-201ENSMUST00000021864 Kdm2bQ6P1G2 1309 aa9.71□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Cfap69Q8BH53 942 aa9.71□□□□□ -0.86
Ssr1-201ENSMUST00000021864 3425401B19RikD3Z1D3 1412 aa9.71□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Nectin2P32507 530 aa9.71□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Jmjd4Q8BFT6 427 aa9.71□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Larp1Q6ZQ58 1072 aaKnown RBP9.71□□□□□ -0.86
Ssr1-201ENSMUST00000021864 NefhP19246 1090 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Gbp4Q61107 620 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ccdc172Q810N9 267 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Golim4Q8BXA1 655 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Nlrp3Q8R4B8 1033 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Slc5a1Q8C3K6 665 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ttc19Q8CC21 365 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Gps2Q921N8 327 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Nphp1Q9QY53 687 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Rsph6aQ8CDR2 708 aa9.7□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ankrd13dQ6PD24 605 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Cabp2Q9JLK4 216 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Fkbp4P30416 458 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Lmtk2Q3TYD6 1471 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ccdc39Q9D5Y1 937 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Cdc45Q9Z1X9 566 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ssr1Q9CY50 286 aaKnown RBP9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Galntl5Q9D4M9 431 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Cfap45Q9D9U9 551 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Nol8Q3UHX0 1147 aaKnown RBP9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Zcchc11B2RX14 1644 aaKnown RBP9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ttll13A4Q9F6 804 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Cetn1P41209 172 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ccdc178Q8CDV0 866 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Tmc1Q8R4P5 757 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Peg3Q3URU2 1571 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Fmn2Q9JL04 1578 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 76 ms