RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Hsp90aa1P07901 733 aaKnown RBP12.54□□□□□ -0.4
Rnft1-201ENSMUST00000020827 Atg4aQ8C9S8 396 aa12.54□□□□□ -0.4
Rnft1-201ENSMUST00000020827 Kif1aP33173 1695 aa12.54□□□□□ -0.4
Rnft1-201ENSMUST00000020827 Dennd6aQ8BH65 605 aa12.53□□□□□ -0.4
Rnft1-201ENSMUST00000020827 Amigo3Q8C2S7 508 aa12.53□□□□□ -0.4
Rnft1-201ENSMUST00000020827 Tshz3Q8CGV9 1081 aa12.53□□□□□ -0.4
Rnft1-201ENSMUST00000020827 Bcar3Q9QZK2 820 aa12.53□□□□□ -0.4
Rnft1-201ENSMUST00000020827 Map3k13Q1HKZ5 959 aa12.52□□□□□ -0.4
Rnft1-201ENSMUST00000020827 Fam84aQ9D650 292 aa12.52□□□□□ -0.4
Rnft1-201ENSMUST00000020827 Pdlim2Q8R1G6 349 aa12.52□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Hoxc9P09633 260 aa12.52□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Stk31Q99MW1 1018 aa12.51□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Terf2O35144 541 aa12.51□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Il4rP16382 810 aa12.51□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Chpf2Q3UU43 768 aa12.51□□□□□ -0.41
Rnft1-201ENSMUST00000020827 NalcnQ8BXR5 1738 aa12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Frmpd2A0A140LI67 1392 aa12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Fchsd2Q3USJ8 740 aa12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Mre11Q61216 706 aa12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Edc3Q8K2D3 508 aaKnown RBP12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 C3P01027 1663 aa12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 4933416C03RikQ3V063 378 aa12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Gnai1B2RSH2 354 aa12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Rreb1Q3UH06 1700 aaKnown RBP12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Gnai3Q9DC51 354 aa12.5□□□□□ -0.41
Rnft1-201ENSMUST00000020827 D430041D05RikF6ZGR6 1678 aa12.49□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Clcn1Q64347 994 aa12.49□□□□□ -0.41
Rnft1-201ENSMUST00000020827 EngaseQ8BX80 734 aa12.49□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Dnajc10Q9DC23 793 aa12.49□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Msh6P54276 1358 aaKnown RBP12.49□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Als2Q920R0 1651 aa12.49□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Ccdc155Q80VJ8 648 aa12.49□□□□□ -0.41
Rnft1-201ENSMUST00000020827 PzpQ61838 1495 aa12.48□□□□□ -0.41
Rnft1-201ENSMUST00000020827 GnpatP98192 678 aa12.48□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Ppm1gQ61074 542 aa12.48□□□□□ -0.41
Rnft1-201ENSMUST00000020827 C5P06684 1680 aa12.48□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Znf692Q3U381 531 aa12.48□□□□□ -0.41
Rnft1-201ENSMUST00000020827 F2rP30558 430 aa12.47□□□□□ -0.41
Rnft1-201ENSMUST00000020827 Ppp6r3Q922D4 844 aa12.46□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Myo5bP21271 1818 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Rabep1O35551 862 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Gdpd2Q9ESM6 539 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Ccdc171E9Q1U1 1324 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Ssh1Q76I79 1042 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Col16a1Q8BLX7 1580 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Fkbp4P30416 458 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 MlecQ6ZQI3 291 aaKnown RBP12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Pnpla7A2AJ88 1352 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Zap70P43404 618 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Gtf3c3Q3TMP1 882 aa12.45□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Pdia3P27773 505 aaKnown RBP12.44□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Zmym3Q9JLM4 1370 aa12.44□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Fyb1O35601 819 aa12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Pa2g4P50580 394 aaKnown RBP12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 EspnlQ3UYR4 1005 aa12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Tgfb1i1Q62219 461 aa12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Exoc6bA6H5Z3 810 aa12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Ets1P27577 440 aa12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Tpx2A2APB8 745 aaKnown RBP12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 LifrP42703 1092 aa12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Sv2bQ8BG39 683 aa12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Atl3Q91YH5 541 aa12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Disp3A3KFU9 1347 aa12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Cdk12Q14AX6 1484 aaKnown RBP12.43□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Znf541Q0GGX2 1363 aa12.42□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Slc39a6Q8C145 765 aa12.42□□□□□ -0.42
Rnft1-201ENSMUST00000020827 PigbQ9JJQ0 542 aa12.42□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Ttll7A4Q9F0 912 aa12.42□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Bloc1s4Q8VED2 215 aa12.42□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Zdhhc9P59268 364 aa12.42□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Cwc27Q3TKY6 469 aa12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Srgap3Q812A2 1099 aa12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Ppp1r42Q8R1Z4 357 aa12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Sytl4Q9R0Q1 673 aa12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Dlg5E9Q9R9 1921 aa12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Evi5lH3BKQ3 813 aa12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Tm6sf1P58749 370 aa12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Foxp4Q9DBY0 795 aaKnown RBP12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Scn7aB1AYL1 1681 aa12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Kcnn1Q9EQR3 537 aa12.41□□□□□ -0.42
Rnft1-201ENSMUST00000020827 4930504O13RikQ8C5Z9 145 aa12.4□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Topaz1E5FYH1 1653 aa12.4□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Q9D2X8 372 aa12.4□□□□□ -0.42
Rnft1-201ENSMUST00000020827 Nol12Q8BG17 217 aa12.39□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Naa30Q8CES0 364 aa12.39□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Cpa2Q504N0 417 aa12.39□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Smim5Q8BT42 78 aa12.39□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Arfgef2A2A5R2 1792 aa12.39□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Q3TQI7 289 aaKnown RBP12.39□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Ap3b2Q9JME5 1082 aa12.39□□□□□ -0.43
Rnft1-201ENSMUST00000020827 RestQ8VIG1 1082 aa12.38□□□□□ -0.43
Rnft1-201ENSMUST00000020827 CemipQ8BI06 1361 aa12.38□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Ppp1r37Q8BKR5 712 aa12.38□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Astn2Q80Z10 1352 aa12.37□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Larp1Q6ZQ58 1072 aaKnown RBP12.37□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Stk3Q9JI10 497 aa12.37□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Pdia6Q922R8 440 aaKnown RBP12.37□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Gm10093D3YYI8 482 aa12.37□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Hdac1O09106 482 aaKnown RBP12.37□□□□□ -0.43
Rnft1-201ENSMUST00000020827 Hmox1P14901 289 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms