RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 AnkarA2RT91 1465 aa22.5■■□□□ 1.19
Ubp1-201ENSMUST00000009885 EzrP26040 586 aaKnown RBP22.49■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Srgap3Q812A2 1099 aa22.49■■□□□ 1.19
Ubp1-201ENSMUST00000009885 PaskQ8CEE6 1383 aa22.49■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Ptpdc1Q6NZK8 747 aa22.49■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Fgd6Q69ZL1 1399 aa22.49■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Cfap65Q3V0B4 1847 aa22.48■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Ptgs1P22437 602 aa22.48■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Tomm22Q9CPQ3 142 aa22.48■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Fmnl2A2APV2 1086 aa22.47■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Bach2P97303 839 aa22.47■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Sv2bQ8BG39 683 aa22.47■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Nol11Q8BJW5 723 aaKnown RBP22.47■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Mmel1Q9JLI3 765 aa22.47■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Nphp1Q9QY53 687 aa22.47■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Dnajc5bQ9CQ94 199 aa22.46■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Atp10dQ8K2X1 1416 aa22.46■■□□□ 1.19
Ubp1-201ENSMUST00000009885 CatipB9EKE5 520 aa22.46■■□□□ 1.19
Ubp1-201ENSMUST00000009885 CrebrfQ8CDG5 640 aaKnown RBP22.46■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Usp54Q8BL06 1588 aaKnown RBP22.46■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Rps6ka5Q8C050 863 aa22.46■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Iqsec2Q5DU25 1478 aa22.46■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Elp1Q7TT37 1333 aaKnown RBP22.46■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Cspp1B2RX88 1205 aa22.45■■□□□ 1.19
Ubp1-201ENSMUST00000009885 CebpzP53569 1052 aaKnown RBP22.45■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Slc4a10Q5DTL9 1118 aa22.45■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Mrps27Q8BK72 415 aaKnown RBP22.45■■□□□ 1.19
Ubp1-201ENSMUST00000009885 Sass6Q80UK7 654 aa22.45■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Kiaa0753Q6A000 959 aa22.45■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Fam184aE9PW83 1143 aa22.44■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Cwc27Q3TKY6 469 aa22.44■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Atg4a-psA0A0G2JFS9 396 aa22.44■■□□□ 1.18
Ubp1-201ENSMUST00000009885 AU022751B1B0V2 589 aa22.44■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Atg4aQ8C9S8 396 aa22.44■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Rbm42Q91V81 474 aaKnown RBP22.44■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Pik3r4Q8VD65 1358 aa22.44■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Zfp251Q6PCX8 632 aa22.43■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Kif1bQ60575 1816 aaKnown RBP22.43■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Slx4ipQ9D7Y9 413 aa22.42■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Slc52a2Q9D8F3 450 aa22.42■■□□□ 1.18
Ubp1-201ENSMUST00000009885 LlphQ9D945 130 aaKnown RBP22.42■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Ints3Q7TPD0 1041 aaKnown RBP22.42■■□□□ 1.18
Ubp1-201ENSMUST00000009885 U2af2P26369 475 aaKnown RBP22.41■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Bms1Q6PGF5 1284 aaKnown RBP22.41■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Ppp1r42Q8R1Z4 357 aa22.41■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Gnai2P08752 355 aaKnown RBP22.41■■□□□ 1.18
Ubp1-201ENSMUST00000009885 F2rP30558 430 aa22.41■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Snx13Q6PHS6 957 aa22.4■■□□□ 1.18
Ubp1-201ENSMUST00000009885 RestQ8VIG1 1082 aa22.4■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Naip7Q9JIB3 1402 aa22.4■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Itsn2Q9Z0R6 1659 aa22.39■■□□□ 1.18
Ubp1-201ENSMUST00000009885 Cfap73J3QPZ5 306 aa22.39■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Nap1l3Q794H2 544 aa22.39■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Cnnm3Q32NY4 713 aa22.39■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Ncbp3Q8BZR9 615 aaKnown RBP22.39■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Cfap74Q3UY96 1578 aa22.38■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Taf3Q5HZG4 932 aa22.38■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Ccdc178Q8CDV0 866 aa22.38■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Sh3bgrQ9WUZ7 214 aa22.37■■□□□ 1.17
Ubp1-201ENSMUST00000009885 PalldQ9ET54 1408 aa22.37■■□□□ 1.17
Ubp1-201ENSMUST00000009885 MpndQ3TV65 487 aa22.36■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Vwa3bJ9JI28 736 aa22.36■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Ppp1r15aP17564 657 aa22.36■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Cdkn1cP49919 348 aa22.36■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Gjb2Q00977 226 aa22.36■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Cchcr1Q8K2I2 770 aa22.35■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Med4Q9CQA5 270 aa22.35■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Ncbp1Q3UYV9 790 aaKnown RBP22.34■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Stx6Q9JKK1 255 aa22.34■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Mum1Q6DID5 682 aa22.34■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Atp2b3Q0VF55 1220 aa22.34■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Lrrc7Q80TE7 1490 aa22.34■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Zpr1Q62384 459 aa22.33■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Gtf3c5Q8R2T8 520 aa22.33■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Pdzrn3Q69ZS0 1063 aa22.33■■□□□ 1.17
Ubp1-201ENSMUST00000009885 Nxf2Q4ZGD8 691 aa22.33■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Nup88Q8CEC0 753 aaKnown RBP22.32■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Iffo2Q8R2V2 512 aa22.32■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Bicd2Q921C5 820 aa22.32■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Ube2hP62257 183 aa22.32■■□□□ 1.16
Ubp1-201ENSMUST00000009885 FosbP13346 338 aa22.32■■□□□ 1.16
Ubp1-201ENSMUST00000009885 MecomP14404 1042 aa22.32■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Tm6sf1P58749 370 aa22.31■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Cep152A2AUM9 1736 aaKnown RBP22.31■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Nucb2P81117 420 aa22.31■■□□□ 1.16
Ubp1-201ENSMUST00000009885 BccipQ9CWI3 316 aa22.31■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Fam83gQ5SWY7 812 aa22.31■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Sos1Q62245 1319 aa22.3■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Gm32742A0A1B0GT42 1604 aa22.3■■□□□ 1.16
Ubp1-201ENSMUST00000009885 TmpoQ61033 693 aaKnown RBP22.3■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Ccdc66Q6NS45 935 aa22.3■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Tceal9Q9DD24 104 aa22.3■■□□□ 1.16
Ubp1-201ENSMUST00000009885 PdcQ9QW08 244 aa22.3■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Zkscan7E9PVW1 718 aa22.3■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Zfp51Q3U4L8 781 aa22.3■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Uggt2E9Q4X2 1504 aa22.3■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Skint5A7XUY5 1461 aa22.29■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Prim1P20664 417 aa22.29■■□□□ 1.16
Ubp1-201ENSMUST00000009885 E4f1Q8CCE9 783 aa22.29■■□□□ 1.16
Ubp1-201ENSMUST00000009885 Nop14Q8R3N1 860 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms