RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Kif24Q6NWW5 1356 aa14.69□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Kif4P33174 1231 aa14.69□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Pdcl2Q78Y63 240 aa14.69□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Glipr1l2Q9CQ35 332 aa14.69□□□□□ -0.06
Rfx1-201ENSMUST00000005600 PtprmP28828 1452 aa14.69□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Syce3B5KM66 88 aa14.68□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Filip1lQ6P6L0 1131 aa14.68□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Rnf214Q8BFU3 668 aaKnown RBP14.68□□□□□ -0.06
Rfx1-201ENSMUST00000005600 NexnQ7TPW1 607 aa14.68□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Gdpd2Q9ESM6 539 aa14.68□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Atp6v1dP57746 247 aa14.67□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Mrps27Q8BK72 415 aaKnown RBP14.67□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Zkscan2G3X952 960 aa14.67□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Tex2Q6ZPJ0 1128 aaKnown RBP14.67□□□□□ -0.06
Rfx1-201ENSMUST00000005600 St18Q80TY4 1045 aa14.67□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Chmp4cQ9D7F7 232 aa14.67□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Dip2cE9PWR4 1557 aa14.67□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Arhgef28P97433 1693 aa14.67□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Phactr2B1AVP0 632 aa14.67□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Plekhg1F6S200 1446 aa14.66□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Ahdc1Q6PAL7 1594 aaKnown RBP14.66□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Rtf1A2AQ19 715 aaKnown RBP14.66□□□□□ -0.06
Rfx1-201ENSMUST00000005600 CltcQ68FD5 1675 aaKnown RBP14.66□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Idi2Q8BFZ6 227 aa14.66□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Hmox1P14901 289 aa14.65□□□□□ -0.06
Rfx1-201ENSMUST00000005600 BccipQ9CWI3 316 aa14.65□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Bcar3Q9QZK2 820 aa14.65□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Atg4a-psA0A0G2JFS9 396 aa14.65□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Sv2bQ8BG39 683 aa14.65□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Atg4aQ8C9S8 396 aa14.65□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Zkscan16A2ALW2 728 aa14.65□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Synj2Q9D2G5 1434 aa14.65□□□□□ -0.06
Rfx1-201ENSMUST00000005600 AglF8VPN4 1532 aa14.65□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Ggnbp2Q5SV77 696 aa14.64□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Rcan3Q9JKK0 239 aa14.64□□□□□ -0.07
Rfx1-201ENSMUST00000005600 RereQ80TZ9 1558 aa14.64□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Smarce1O54941 411 aaKnown RBP14.64□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Casc1Q6TDU8 730 aa14.64□□□□□ -0.07
Rfx1-201ENSMUST00000005600 AnlnQ8K298 1121 aaKnown RBP14.64□□□□□ -0.07
Rfx1-201ENSMUST00000005600 AdgbG3UZ78 1657 aa14.64□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Adamts7Q68SA9 1657 aa14.64□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Gse1Q3U3C9 1213 aa14.64□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Nphp1Q9QY53 687 aa14.63□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Abca14E9Q8F8 1683 aa14.63□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Rbm27Q5SFM8 1060 aaKnown RBP14.63□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Rsph4aQ8BYM7 716 aa14.63□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Gm9992B2RWK3 458 aa14.63□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Hoxb7P09024 217 aa14.63□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Gadd45bP22339 160 aa14.63□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Unc93aQ710D3 458 aa14.63□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Gnai2P08752 355 aaKnown RBP14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Chl1P70232 1209 aa14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Psme1P97371 249 aa14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Afap1Q80YS6 731 aa14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Eif4a2P10630 407 aa14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Zdhhc9P59268 364 aa14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 CalcaP70160 136 aa14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Q3TQI7 289 aaKnown RBP14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 TmpoQ61033 693 aaKnown RBP14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Ptpdc1Q6NZK8 747 aa14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Yeats2Q3TUF7 1407 aa14.62□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Srgap3Q812A2 1099 aa14.61□□□□□ -0.07
Rfx1-201ENSMUST00000005600 KinQ8K339 391 aa14.61□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Qser1A2BIE1 1698 aa14.61□□□□□ -0.07
Rfx1-201ENSMUST00000005600 LlphQ9D945 130 aaKnown RBP14.61□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Gm45015A0A140LII9 184 aa14.6□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Gm18336A0A140LIU8 765 aa14.6□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Pank2Q3U4S0 443 aa14.6□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Asxl2Q8BZ32 1370 aa14.6□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Cpa2Q504N0 417 aa14.59□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Txndc2Q6P902 515 aa14.59□□□□□ -0.07
Rfx1-201ENSMUST00000005600 CatipB9EKE5 520 aa14.59□□□□□ -0.07
Rfx1-201ENSMUST00000005600 RestQ8VIG1 1082 aa14.59□□□□□ -0.07
Rfx1-201ENSMUST00000005600 NktrP30415 1453 aa14.59□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Kdm4aQ8BW72 1064 aa14.59□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Spef2Q8C9J3 1734 aa14.59□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Ppp1r42Q8R1Z4 357 aa14.59□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Erbb4Q61527 1308 aa14.58□□□□□ -0.07
Rfx1-201ENSMUST00000005600 Gzf1Q4VBD9 706 aa14.58□□□□□ -0.08
Rfx1-201ENSMUST00000005600 NpatQ8BMA5 1420 aa14.58□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Zscan25B2RX31 543 aa14.58□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Vwa3bJ9JI28 736 aa14.58□□□□□ -0.08
Rfx1-201ENSMUST00000005600 EvcP57680 1005 aa14.58□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Ripk4Q9ERK0 786 aa14.58□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Ccdc173A0JLY1 547 aa14.57□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Nol12Q8BG17 217 aa14.57□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Pcmtd1P59913 357 aa14.57□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Zfp91Q62511 572 aa14.57□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Tshz3Q8CGV9 1081 aa14.57□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Jakmip1Q8BVL9 626 aa14.57□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Plppr3Q7TPB0 716 aa14.56□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Prune1Q8BIW1 454 aa14.56□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Olfml1Q8BSH2 233 aa14.56□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Ap3b2Q9JME5 1082 aa14.56□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Nol11Q8BJW5 723 aaKnown RBP14.55□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Prim1P20664 417 aa14.55□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Anapc15P60007 132 aa14.55□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Cwc27Q3TKY6 469 aa14.55□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Chd1lQ9CXF7 900 aa14.55□□□□□ -0.08
Rfx1-201ENSMUST00000005600 Fam83gQ5SWY7 812 aa14.54□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms