RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 CenppQ9CZ92 286 aa11.43□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Pdia4P08003 638 aaKnown RBP11.42□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Gdpd2Q9ESM6 539 aa11.42□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Samd1D3YXK1 519 aa11.42□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Fyb1O35601 819 aa11.42□□□□□ -0.58
Col6a1-201ENSMUST00000001147 EvcP57680 1005 aa11.42□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Nucb1Q02819 459 aaKnown RBP11.42□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Setd1aE9PYH6 1716 aa11.41□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Fam43aQ8BUP8 424 aa11.41□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Gsdma3Q5Y4Y6 464 aa11.41□□□□□ -0.58
Col6a1-201ENSMUST00000001147 4931400O07RikQ9D4M5 137 aa11.41□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Clstn1Q9EPL2 979 aa11.41□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Kiaa0754Q69ZZ9 979 aa11.41□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Fez1Q8K0X8 392 aa11.41□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Sh3bgrQ9WUZ7 214 aa11.41□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Gadd45bP22339 160 aa11.4□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Chpf2Q3UU43 768 aa11.4□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Trim30aP15533 496 aa11.4□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Ddx11Q6AXC6 880 aa11.4□□□□□ -0.58
Col6a1-201ENSMUST00000001147 Aldh8a1Q8BH00 487 aa11.4□□□□□ -0.58
Col6a1-201ENSMUST00000001147 ImpactO55091 318 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Samm50Q8BGH2 469 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Setd1bQ8CFT2 1985 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Znf326O88291 580 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Bicd2Q921C5 820 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Antxr1Q9CZ52 562 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Zbtb22Q9Z0G7 638 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Cfap65Q3V0B4 1847 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Gm10471E9Q1C7 252 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Ubap1lG3UW59 384 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Tmem132eQ6IEE6 982 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Q9D9S1 216 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Gm32742A0A1B0GT42 1604 aa11.39□□□□□ -0.59
Col6a1-201ENSMUST00000001147 R3hcc1Q8BSI6 488 aa11.38□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Rnf17Q99MV7 1640 aa11.38□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Gm973E9Q295 1059 aa11.38□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Brf1Q8CFK2 676 aa11.38□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Ppp6r3Q922D4 844 aa11.38□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Tmx3Q8BXZ1 456 aa11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Rcan3Q9JKK0 239 aa11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Gjb2Q00977 226 aa11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Q8C5K5 320 aa11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Top1mtQ8R4U6 593 aa11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Mcm3P25206 812 aaKnown RBP11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 RdxP26043 583 aaKnown RBP11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Cnnm3Q32NY4 713 aa11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Ccer1Q9CQL2 403 aa11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Trim28Q62318 834 aa11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Cavin2Q63918 418 aaKnown RBP11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Chmp7Q8R1T1 451 aa11.37□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Prune1Q8BIW1 454 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 TimelessQ9R1X4 1197 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Cspp1B2RX88 1205 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Abcc3B2RX12 1523 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Talpid3E9PV87 1520 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Atg4a-psA0A0G2JFS9 396 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Gm10563F6WIE4 79 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 F2rP30558 430 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Zap70P43404 618 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Atg4aQ8C9S8 396 aa11.36□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Zkscan16A2ALW2 728 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Kdm4cQ8VCD7 1054 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Cyp27a1Q9DBG1 533 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Nos1Q9Z0J4 1429 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Nol8Q3UHX0 1147 aaKnown RBP11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 RestQ8VIG1 1082 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Fmnl2A2APV2 1086 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Tpd52l1O54818 204 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Rnf20Q5DTM8 973 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Btbd11Q6GQW0 1109 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Slx4ipQ9D7Y9 413 aa11.35□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Pik3r4Q8VD65 1358 aa11.34□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Ccdc173A0JLY1 547 aa11.34□□□□□ -0.59
Col6a1-201ENSMUST00000001147 EappQ5BU09 281 aa11.34□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Cchcr1Q8K2I2 770 aa11.34□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Kif2cQ922S8 721 aa11.34□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Uhrf1bp1lA2RSJ4 1457 aa11.34□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Eya1P97767 591 aa11.33□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Ncbp3Q8BZR9 615 aaKnown RBP11.33□□□□□ -0.59
Col6a1-201ENSMUST00000001147 Efcab6Q6P1E8 1516 aa11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Map7d2A2AG50 781 aa11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Cnnm1Q0GA42 951 aa11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Dixdc1Q80Y83 711 aa11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Aldh1l2Q8K009 923 aa11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Tceanc2Q8R2M0 207 aa11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 LlphQ9D945 130 aaKnown RBP11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 PnnO35691 725 aaKnown RBP11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 PsapQ61207 557 aaKnown RBP11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Mical1Q8VDP3 1048 aa11.33□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Naip7Q9JIB3 1402 aa11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Nol10Q5RJG1 687 aaKnown RBP11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Hnrnpul1Q8VDM6 859 aaKnown RBP11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Hoxb7P09024 217 aa11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Anapc15P60007 132 aa11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Zbtb45Q52KG4 520 aa11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Mrps27Q8BK72 415 aaKnown RBP11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Atp8b2P98199 1209 aa11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Ccdc155Q80VJ8 648 aa11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Amotl2Q8K371 772 aa11.32□□□□□ -0.6
Col6a1-201ENSMUST00000001147 Slc26a8Q8R0C3 999 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms