RNA–Protein interactions for RNA: ENSMUST00000000619.7

Clcn4-201, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clcn4, Length 4,607 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-201ENSMUST00000000619 Paxip1Q6NZQ4 1056 aa13.58□□□□□ -0.24
Clcn4-201ENSMUST00000000619 CrebrfQ8CDG5 640 aaKnown RBP13.58□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Sf3a1Q8K4Z5 791 aaKnown RBP13.58□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Pdia3P27773 505 aaKnown RBP13.57□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Chpf2Q3UU43 768 aa13.57□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Bag4Q8CI61 457 aa13.57□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Kidins220E9Q9B7 1793 aa13.57□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Neurod6P48986 337 aa13.57□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Usp48Q3V0C5 1052 aa13.56□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Adgrb3Q80ZF8 1522 aa13.56□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Rasa1E9PYG6 1038 aa13.56□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Cpa2Q504N0 417 aa13.56□□□□□ -0.24
Clcn4-201ENSMUST00000000619 PsapQ61207 557 aaKnown RBP13.56□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Iqgap3F8VQ29 1632 aa13.56□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Utp3Q9JI13 469 aaKnown RBP13.56□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Mad1l1Q9WTX8 717 aaKnown RBP13.56□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Fmnl2A2APV2 1086 aa13.55□□□□□ -0.24
Clcn4-201ENSMUST00000000619 CalcaP70160 136 aa13.55□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Tmem132eQ6IEE6 982 aa13.55□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Nap1l3Q794H2 544 aa13.55□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Uhrf1bp1lA2RSJ4 1457 aa13.55□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Pik3r4Q8VD65 1358 aa13.55□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Babam1Q3UI43 333 aa13.55□□□□□ -0.24
Clcn4-201ENSMUST00000000619 R3hcc1Q8BSI6 488 aa13.55□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Nucb1Q02819 459 aaKnown RBP13.54□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Btbd11Q6GQW0 1109 aa13.54□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Aldh1l2Q8K009 923 aa13.54□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Tshz3Q8CGV9 1081 aa13.54□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Nsfl1cQ9CZ44 370 aaKnown RBP13.54□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Q8C5K5 320 aa13.54□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Atp10aO54827 1508 aa13.53□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Snap23O09044 210 aa13.53□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Kif20aP97329 887 aa13.53□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Frmpd2A0A140LI67 1392 aa13.53□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Nol10Q5RJG1 687 aaKnown RBP13.53□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Gimap6Q8K349 305 aa13.53□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Chd1P40201 1711 aa13.53□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Syce3B5KM66 88 aa13.53□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Arhgap23Q69ZH9 1483 aa13.53□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Eya1P97767 591 aa13.52□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Rnf20Q5DTM8 973 aa13.52□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Cchcr1Q8K2I2 770 aa13.52□□□□□ -0.24
Clcn4-201ENSMUST00000000619 Astn2Q80Z10 1352 aa13.52□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Znf326O88291 580 aa13.52□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Polr3gQ6NXY9 223 aa13.52□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Taok2Q6ZQ29 1240 aa13.52□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Depdc5P61460 1591 aa13.52□□□□□ -0.25
Clcn4-201ENSMUST00000000619 NpatQ8BMA5 1420 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Zranb3Q6NZP1 1069 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Bloc1s4Q8VED2 215 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Q9D9S1 216 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Gtf2a1Q99PM3 378 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 EvcP57680 1005 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Brf1Q8CFK2 676 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Top1mtQ8R4U6 593 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Cnnm1Q0GA42 951 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Gpatch11Q3UFS4 262 aa13.51□□□□□ -0.25
Clcn4-201ENSMUST00000000619 ScaperF8VQ70 1398 aaKnown RBP13.5□□□□□ -0.25
Clcn4-201ENSMUST00000000619 MsnP26041 577 aaKnown RBP13.5□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Synj2Q9D2G5 1434 aa13.5□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Pof1bQ8K4L4 587 aa13.5□□□□□ -0.25
Clcn4-201ENSMUST00000000619 ImpactO55091 318 aa13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Il4rP16382 810 aa13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Tmem94Q7TSH8 1360 aa13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Ppp6r3Q922D4 844 aa13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Zap70P43404 618 aa13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 HdgfP51859 237 aaKnown RBP13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Adam1bQ8R534 806 aa13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Sh3bgrQ9WUZ7 214 aa13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Xrn1P97789 1719 aaKnown RBP13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Prex1Q69ZK0 1650 aa13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 GphnQ8BUV3 769 aaKnown RBP13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Amotl2Q8K371 772 aa13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Rrp9Q91WM3 475 aaKnown RBP13.49□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Knl1Q66JQ7 1612 aa13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Evi5lH3BKQ3 813 aa13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Cct4P80315 539 aaKnown RBP13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Plekhg1F6S200 1446 aa13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Adgrl3Q80TS3 1537 aa13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Tm6sf1P58749 370 aa13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Atp8b2P98199 1209 aa13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Kdm4cQ8VCD7 1054 aa13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Gjb2Q00977 226 aa13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Znf692Q3U381 531 aa13.48□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Atg4a-psA0A0G2JFS9 396 aa13.47□□□□□ -0.25
Clcn4-201ENSMUST00000000619 FosbP13346 338 aa13.47□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Atg4aQ8C9S8 396 aa13.47□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Cspp1B2RX88 1205 aa13.47□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Fez1Q8K0X8 392 aa13.47□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Bicd2Q921C5 820 aa13.47□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Ccer1Q9CQL2 403 aa13.47□□□□□ -0.25
Clcn4-201ENSMUST00000000619 TefQ9JLC6 301 aa13.47□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Eif3aP23116 1344 aaKnown RBP13.47□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Myo5cE9Q1F5 1742 aa13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Hoxa7P02830 229 aa13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Olfml1Q8BSH2 233 aa13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 RestQ8VIG1 1082 aa13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 PhaxQ9JJT9 385 aaKnown RBP13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Psma5Q9Z2U1 241 aaKnown RBP13.46□□□□□ -0.25
Clcn4-201ENSMUST00000000619 Pdcd11Q6NS46 1862 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms