RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 HSPH1Q92598 858 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 ARHGEF2Q92974 986 aaKnown RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 FAM120BQ96EK7 910 aaKnown RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 PERPQ96FX8 193 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 FEM1CQ96JP0 617 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CCDC17Q96LX7 622 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 KLHL15Q96M94 604 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 ZNF347Q96SE7 839 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 MAP7D2Q96T17 732 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 PIP5K1AQ99755 562 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 FAM118BQ9BPY3 351 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CENPOQ9BU64 300 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 EFHD1Q9BUP0 239 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 STRA6Q9BX79 667 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 NUAK2Q9H093 628 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 VCPKMTQ9H867 229 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 Q9N2J8 555 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 TMEM184CQ9NVA4 438 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 ARL15Q9NXU5 204 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 EHD2Q9NZN4 543 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 RAI14Q9P0K7 980 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 BCCIPQ9P287 314 aaKnown RBP eCLIP2.58□□□□□ -2
SMARCB1-208ENST00000634926 UPB1Q9UBR1 384 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 HSPB7Q9UBY9 170 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 ADD3Q9UEY8 706 aaKnown RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 FBXO40Q9UH90 709 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 LIMA1Q9UHB6 759 aaKnown RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 CDH22Q9UJ99 828 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 MAFFQ9ULX9 164 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CLDN16Q9Y5I7 305 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 EMSYQ7Z589 1322 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 PRRC2BQ5JSZ5 2229 aaKnown RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 KIAA1217Q5T5P2 1943 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 FRYQ5TBA9 3013 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 MICAL3Q7RTP6 2002 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 SPTBN4Q9H254 2564 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 FREM2Q5SZK8 3169 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 KMT2BQ9UMN6 2715 aaPredicted RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 RALGAPA2Q2PPJ7 1873 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 hCG_1807616A0A1W2PRN6 198 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 PTGES3LE9PB15 166 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 POC1B-GALNT4F8VUJ3 575 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 CCER2I3L3R5 266 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 TAF4O00268 1085 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 VWA5AO00534 786 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 GCATO75600 419 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SLC25A27O95847 323 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SNAI1O95863 264 aaPredicted RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 ADAP00813 363 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SERPINC1P01008 464 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 GALTP07902 379 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 FGF2P09038 288 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 CLTBP09497 229 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 FCGR2AP12318 317 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 AKR1A1P14550 325 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 AKR1B1P15121 316 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 RRM1P23921 792 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 KRT20P35900 424 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 HADHAP40939 763 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SKIV2L2P42285 1042 aaKnown RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 CPA2P48052 419 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SOX2P48431 317 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 OLR1P78380 273 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 PRAMEP78395 509 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 CCNA1P78396 465 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 TMEM115Q12893 351 aaPredicted RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 AIMP2Q13155 320 aaKnown RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 BECN1Q14457 450 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 COG2Q14746 738 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 KPNB1Q14974 876 aaKnown RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 MED22Q15528 200 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 RPE65Q16518 533 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 GSTA3Q16772 222 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 PFKFB3Q16875 520 aaPredicted RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 PLK5Q496M5 336 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 CERKLQ49MI3 558 aaPredicted RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 FBXO43Q4G163 708 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 TTC39AQ5SRH9 613 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 PLEKHS1Q5SXH7 462 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 C10orf76Q5T2E6 689 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 C12orf60Q5U649 245 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 MFSD14CQ5VZR4 134 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SARM1Q6SZW1 724 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 TMCO3Q6UWJ1 677 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 DHRS13Q6UX07 377 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 IL20RBQ6UXL0 311 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 TMEM179Q6ZVK1 233 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 PRSS45Q7RTY3 260 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SLC46A3Q7Z3Q1 461 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SZRD1Q7Z422 152 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 TFAP2DQ7Z6R9 452 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 TADA2BQ86TJ2 420 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 ZNF329Q86UD4 541 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 KLBQ86Z14 1044 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 RHPN2Q8IUC4 686 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 UEVLDQ8IX04 471 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 ADGRF2Q8IZF7 708 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 GHDCQ8N2G8 530 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 WDTC1Q8N5D0 677 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 FAM47BQ8NA70 645 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms