RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 MAMDC2Q7Z304 686 aaPredicted RBP17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 LRRC49Q8IUZ0 686 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 AOPEPQ8N6M6 819 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 CXorf40BQ96DE9 158 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 TRIM55Q9BYV6 548 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 TAS2R14Q9NYV8 317 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 ZNF451Q9Y4E5 1061 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 SCINQ9Y6U3 715 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 RGSL1A5PLK6 1076 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 DPM1O60762 260 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 SLC25A14O95258 325 aaPredicted RBP17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 ZNF165P49910 485 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 TUBB3Q13509 450 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 KRT81Q14533 505 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 CHRNA6Q15825 494 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 DPYSL2Q16555 572 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 UGT8Q16880 541 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 EIF2S3LQ2VIR3 472 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 ZNF569Q5MCW4 686 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 CCDC122Q5T0U0 273 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 CDKAL1Q5VV42 579 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 TIGD7Q6NT04 549 aaPredicted RBP17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 CRTC3Q6UUV7 619 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 PRSS42Q7Z5A4 293 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 POLNQ7Z5Q5 900 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 SYVN1Q86TM6 617 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 SIDT2Q8NBJ9 832 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 CSPG4P5Q96PW8 444 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 SPATA16Q9BXB7 569 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 BRD8Q9H0E9 1235 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 ING2Q9H160 280 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 OR2AG1Q9H205 316 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 PCDH9Q9HC56 1237 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 MRPL47Q9HD33 250 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 ETNK2Q9NVF9 386 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 OGFRQ9NZT2 677 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 ATXN10Q9UBB4 475 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 CNOT6Q9ULM6 557 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 DNAJC16Q9Y2G8 782 aa17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 PCDHGA9Q9Y5G4 932 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-211ENST00000609024 GOLGA6L3A6NEY3 463 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 FADS2P1A8MWK0 482 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 GPR89AB7ZAQ6 455 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 GPR89BP0CG08 455 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 ZNF8P17098 575 aaPredicted RBP17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 PTPN4P29074 926 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 PCK1P35558 622 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 CAPZBP47756 277 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 SPINT3P49223 89 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 CLCNKAP51800 687 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 RPL26P61254 145 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 CHAF1BQ13112 559 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 INPP5JQ15735 1006 aaPredicted RBP17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 PLA2G4EQ3MJ16 856 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 HENMT1Q5T8I9 393 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 BPHLQ86WA6 291 aaPredicted RBP17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 RBM12BQ8IXT5 1001 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 ZNF653Q96CK0 615 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 TDRD1Q9BXT4 1180 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 POT1Q9NUX5 634 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 MYO1AQ9UBC5 1043 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 RPL26L1Q9UNX3 145 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 SLC30A1Q9Y6M5 507 aa17.08■□□□□ 0.32
CHMP4A-211ENST00000609024 LGALS16A8MUM7 142 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 KMOO15229 486 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 KIF1CO43896 1103 aaKnown RBP17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 VCLP18206 1134 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 NELFEP18615 380 aaKnown RBP17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 IDSP22304 550 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 SLC19A1P41440 591 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 HALP42357 657 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 DSC2Q02487 901 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 ACY1Q03154 408 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 ESPL1Q14674 2120 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 ZNF787Q6DD87 383 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 KLHL35Q6PF15 583 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 CYP4V2Q6ZWL3 525 aaPredicted RBP17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 LRRTM4Q86VH4 590 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 TEX26Q8N6G2 289 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 KLHL6Q8WZ60 621 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 UBXN4Q92575 508 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 TRIM11Q96F44 468 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 FCRL4Q96PJ5 515 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 MLPHQ9BV36 600 aaPredicted RBP17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 TRIM39Q9HCM9 518 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 ARFGAP3Q9NP61 516 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 FANCLQ9NW38 375 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 RBM22Q9NW64 420 aaKnown RBP eCLIP17.07■□□□□ 0.326e-7■□□□□ 8.2
CHMP4A-211ENST00000609024 SCHIP1Q9P0W5 487 aaPredicted RBP17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 PCDHGB7Q9Y5F8 929 aa17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 ZNF106Q9H2Y7 1883 aaKnown RBP17.07■□□□□ 0.32
CHMP4A-211ENST00000609024 TNRC6AQ8NDV7 1962 aaKnown RBP17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 TCP11X1B4DZS4 312 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 SORBS2O94875 1100 aaKnown RBP17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 FTLP02792 175 aaPredicted RBP17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 RPS18P62269 152 aaKnown RBP17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 MRPL49Q13405 166 aaKnown RBP17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 ALS2CLQ60I27 953 aa17.06■□□□□ 0.32
CHMP4A-211ENST00000609024 CPZQ66K79 652 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms