RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 OR9I1Q8NGQ6 314 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 PBXIP1Q96AQ6 731 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 ZNF689Q96CS4 500 aaPredicted RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 DUS3LQ96G46 650 aaKnown RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 KCNA7Q96RP8 456 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 SLC30A3Q99726 388 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 FAM192AQ9GZU8 254 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 TUBB1Q9H4B7 451 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 SUFUQ9UMX1 484 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 FNDC3AQ9Y2H6 1198 aaKnown RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 AP4S1Q9Y587 144 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 TNPO3Q9Y5L0 923 aaKnown RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 CPQQ9Y646 472 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 DENRO43583 198 aaKnown RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 GREM1O60565 184 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 S100BP04271 92 aaPredicted RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 CAPNS1P04632 268 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 RPS3P23396 243 aaKnown RBP eCLIP18.99■□□□□ 0.633e-8■■□□□ 13.2
PRKCSH-209ENST00000589838 PAX7P23759 505 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 BCL2L1Q07817 233 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 EML3Q32P44 896 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 ATXN7L2Q5T6C5 722 aaPredicted RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 LAYNQ6UX15 382 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 GPR65Q8IYL9 337 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 ADAMTS19Q8TE59 1207 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 KLHL32Q96NJ5 620 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 GBP5Q96PP8 586 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 TRAPPC9Q96Q05 1148 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 ZNF334Q9HCZ1 680 aaPredicted RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 RIC8BQ9NVN3 520 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 TMEM45AQ9NWC5 275 aa18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 CNOT11Q9UKZ1 510 aaKnown RBP18.99■□□□□ 0.63
PRKCSH-209ENST00000589838 ABHD14A-ACY1A0A1B0GW23 586 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 CAPN8A6NHC0 703 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 NCF1BA6NI72 391 aaPredicted RBP18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 NCF1CA8MVU1 366 aaPredicted RBP18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 TXNDC9O14530 226 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 RNASEH1O60930 286 aaKnown RBP18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 NCF1P14598 390 aaPredicted RBP18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 IRAK1BP1Q5VVH5 260 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 GPRIN3Q6ZVF9 776 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 LYSMD3Q7Z3D4 306 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 CPNE9Q8IYJ1 553 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 MINDY1Q8N5J2 469 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 FAM156AQ8NDB6 213 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 PIH1D2Q8WWB5 315 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 MRPS31Q92665 395 aaKnown RBP18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 TUBGCP5Q96RT8 1024 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 SLC22A12Q96S37 553 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 PKP2Q99959 881 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 CLPBQ9H078 707 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 SARS2Q9NP81 518 aaKnown RBP18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 APPL1Q9UKG1 709 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 BTRCQ9Y297 605 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 OBSL1O75147 1896 aa18.98■□□□□ 0.63
PRKCSH-209ENST00000589838 PRORSD1PA6NEY8 169 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 ZCCHC18P0CG32 403 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 CLCN2P51788 898 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 CLCN7P51798 805 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 FOXM1Q08050 763 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 PDK3Q15120 406 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 MPP7Q5T2T1 576 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 TXNDC8Q6A555 127 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 PTRHD1Q6GMV3 140 aaKnown RBP18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 FRA10AC1Q70Z53 315 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 ADAMTSL2Q86TH1 951 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 SYVN1Q86TM6 617 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 TICAM1Q8IUC6 712 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 CMTR2Q8IYT2 770 aaKnown RBP18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 CPXM2Q8N436 756 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 CHCHD4Q8N4Q1 142 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 PAF1Q8N7H5 531 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 DDI1Q8WTU0 396 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 GCNAQ96QF7 691 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 ZNF382Q96SR6 550 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 TRIM15Q9C019 465 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 RNF208Q9H0X6 261 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 IL21Q9HBE4 155 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 COL4A6Q14031 1691 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 TCRBV3S1A0A5B6 114 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 SOCS5O75159 536 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 CYBBP04839 570 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 PRR35P0CG20 571 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 CTPS1P17812 591 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 ITGALP20701 1170 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 SLC7A1P30825 629 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 RGS4P49798 205 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 AGTR2P50052 363 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 SLC7A2P52569 658 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 ATXN3P54252 364 aaPredicted RBP18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 TRIM60Q495X7 471 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 MPPE1Q53F39 396 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 DHFR2Q86XF0 187 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 RBFAQ8N0V3 343 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 ZUFSPQ96AP4 578 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 GPATCH1Q9BRR8 931 aaKnown RBP18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 PCDHAC1Q9H158 963 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 ZFYVE1Q9HBF4 777 aa18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 KIAA1522Q9P206 1035 aaPredicted RBP18.97■□□□□ 0.63
PRKCSH-209ENST00000589838 GNPTGQ9UJJ9 305 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms