RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 ZNF852Q6ZMS4 543 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 KRBA2Q6ZNG9 492 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 TAOK1Q7L7X3 1001 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 NFE4Q86UQ8 179 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 KMT5CQ86Y97 462 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 TDRPQ86YL5 185 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 DHX40Q8IX18 779 aaKnown RBP2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 SLC35F3Q8IY50 421 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 DSELQ8IZU8 1212 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 DEFB123Q8N688 67 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 AGBL3Q8NEM8 1001 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 HMGCLL1Q8TB92 370 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 GRAPLQ8TC17 118 aaPredicted RBP2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 CDCA5Q96FF9 252 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 CD180Q99467 661 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 LITAFQ99732 161 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 CMKLR1Q99788 373 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 PHF7Q9BWX1 381 aaPredicted RBP2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 PLEKHA5Q9HAU0 1116 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 MKKSQ9NPJ1 570 aaPredicted RBP2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 ITM2CQ9NQX7 267 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 TMEM30AQ9NV96 361 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 MTMR10Q9NXD2 777 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 IL1RAPL1Q9NZN1 696 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 SUFUQ9UMX1 484 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 OR2W1Q9Y3N9 320 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 LSM4Q9Y4Z0 139 aaKnown RBP2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 ABCC6O95255 1503 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 LTN1O94822 1766 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 SMCHD1A6NHR9 2005 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 DOCK3Q8IZD9 2030 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 EYSQ5T1H1 3165 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 ACEP12821 1306 aa2.4□□□□□ -2.03
SUB1P3-201ENST00000564581 BRCA2P51587 3418 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 IGKV3D-15A0A087WSY6 115 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 LILRA5A6NI73 299 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 PMS2P5A8MQ11 134 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 PRSS1P07477 247 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 MMP2P08253 660 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 CNPP09543 421 aaKnown RBP2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 CD53P19397 219 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 AGAP20933 346 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 CHATP28329 748 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 KRTAP10-3P60369 221 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 SEC61BP60468 96 aaKnown RBP2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 TMF1P82094 1093 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 VEPH1Q14D04 833 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 TAF11Q15544 211 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 TMEM30BQ3MIR4 351 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 SLC45A4Q5BKX6 768 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 ANKRD45Q5TZF3 282 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 CST9Q5W186 159 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 ARHGAP17Q68EM7 881 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 FAM109BQ6ICB4 259 aaPredicted RBP2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 RAD9BQ6WBX8 426 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 KCTD8Q6ZWB6 473 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 ADGRG6Q86SQ4 1221 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 MYPOPQ86VE0 399 aaPredicted RBP2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 C2CD5Q86YS7 1000 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 C1orf87Q8N0U7 546 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 ZCCHC9Q8N567 271 aaKnown RBP2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 SCCPDHQ8NBX0 429 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 SH3KBP1Q96B97 665 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 ZNF524Q96C55 264 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 F2RL3Q96RI0 385 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 BBS4Q96RK4 519 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 MPHOSPH6Q99547 160 aaKnown RBP2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 LBHD1Q9BQE6 289 aaPredicted RBP2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 C1QTNF1Q9BXJ1 281 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 TAOK3Q9H2K8 898 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 NOD2Q9HC29 1040 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 PCDH9Q9HC56 1237 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 MAGEE1Q9HCI5 957 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 RNF186Q9NXI6 227 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 STK26Q9P289 416 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 HACL1Q9UJ83 578 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 CARD8Q9Y2G2 431 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 STON1Q9Y6Q2 735 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 ZNF646O15015 1829 aaPredicted RBP2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 TOGARAM1Q9Y4F4 1720 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 EP300Q09472 2414 aaPredicted RBP2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 TTC21AQ8NDW8 1320 aa2.39□□□□□ -2.03
SUB1P3-201ENST00000564581 SCN11AQ9UI33 1791 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 CNOT1A5YKK6 2376 aaKnown RBP2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 POLR3AO14802 1390 aaPredicted RBP2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 ANKRD36BQ8N2N9 1353 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 USP47Q96K76 1375 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 ZFHX2Q9C0A1 2572 aaPredicted RBP2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 DVL1O14640 695 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 EXTL3O43909 919 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 TACC1O75410 805 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 URODP06132 367 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 CAPN2P17655 700 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 SHMT1P34896 483 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 EPHX2P34913 555 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 GNL1P36915 607 aaPredicted RBP2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 DVL1P1P54792 670 aaPredicted RBP2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 UBE4AQ14139 1066 aa2.38□□□□□ -2.03
SUB1P3-201ENST00000564581 BRD3Q15059 726 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms