RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ZNF550Q7Z398 422 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 PIWIL4Q7Z3Z4 852 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 OR14K1Q8NGZ2 314 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 MFSD8Q8NHS3 518 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 MCMBPQ9BTE3 642 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 GTPBP2Q9BX10 602 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 MROH8Q9H579 483 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 FARSBQ9NSD9 589 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 LOC100509620A0A075B734 347 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 FXYD6-FXYD2A0A087WZ82 144 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF132P52740 706 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 MAB21L1Q13394 359 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 KCNT2Q6UVM3 1135 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 PRR23CQ6ZRP0 262 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 UBE2R2Q712K3 238 aaPredicted RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 SP8Q8IXZ3 490 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 PNPT1Q8TCS8 783 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 C12orf43Q96C57 262 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 FXYD6Q9H0Q3 95 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 FBXO6Q9NRD1 293 aaPredicted RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 C1orf109Q9NX04 203 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 TSPOAP1O95153 1857 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 ADAMDEC1O15204 470 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 GFOD2Q3B7J2 385 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 SCGB2B2Q4G0G5 96 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 EIPR1Q53HC9 387 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 GRIN3AQ8TCU5 1115 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC7A6OSQ96CW6 309 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZFP3Q96NJ6 502 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 GNG13Q9P2W3 67 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CPNE3O75131 537 aaKnown RBP13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 TFEBP19484 476 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC1A2P43004 574 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 TUFMP49411 452 aaKnown RBP13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC26A2P50443 739 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 C6orf52Q5T4I8 152 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CNOT6Q9ULM6 557 aaKnown RBP13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CLCA1A8K7I4 914 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 IFNA10P01566 189 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CREMQ03060 361 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 TSGA10IPQ3SY00 556 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 PABPC1LQ4VXU2 614 aaKnown RBP13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CRTC2Q53ET0 693 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 OR2T12Q8NG77 320 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 BRSK1Q8TDC3 778 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 TXN2Q99757 166 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC5A7Q9GZV3 580 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 L2HGDHQ9H9P8 463 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 GAKO14976 1311 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 COL15A1P39059 1388 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 MYH11P35749 1972 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 AZIN1O14977 448 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 PDPK1O15530 556 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 PTPN6P29350 595 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 ATP6V0D1P61421 351 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 DNASE1L3Q13609 305 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 PON3Q15166 354 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 FIGNQ5HY92 759 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 PGM2Q96G03 612 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 NODALQ96S42 347 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CALML5Q9NZT1 146 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 A0A0J9YYE9 177 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 TVP23AA6NH52 213 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CCNYL2Q5T2Q4 361 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CENPSQ8N2Z9 138 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CADM2Q8N3J6 435 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 GALNT15Q8N3T1 639 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 COQ8AQ8NI60 647 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 BORCS8Q96FH0 119 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 ZNF570Q96NI8 536 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 C11orf16Q9NQ32 467 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 PCDHB9Q9Y5E1 797 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 NT5EP21589 574 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 ADRA1DP25100 572 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 PSMB4P28070 264 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 NDST1P52848 882 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 FOXR1Q6PIV2 292 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 PTF1AQ7RTS3 328 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 CNDP2Q96KP4 475 aaKnown RBP13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 JSRP1Q96MG2 331 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 STARD7Q9NQZ5 370 aa13.76□□□□□ -0.21
CSPG4P12-202ENST00000559989 IFNA1P01562 189 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 AMHP03971 560 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 LCN1P31025 176 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 POLR2JP52435 117 aaKnown RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 RAB5BP61020 215 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 DUSP4Q13115 394 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 C3orf33Q6P1S2 294 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 FOXRED2Q8IWF2 684 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 UBE2J2Q8N2K1 259 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 S100A14Q9HCY8 104 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 TMEM184CQ9NVA4 438 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 PCYT1BQ9Y5K3 369 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 WASF2Q9Y6W5 498 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 COLEC10Q9Y6Z7 277 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 CROCC2H7BZ55 1655 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 HYKKA2RU49 373 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 APOC4-APOC2K7ER74 178 aa13.75□□□□□ -0.21
CSPG4P12-202ENST00000559989 M0QX08 132 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms