RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 HDAC11Q96DB2 347 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 OR2AG1Q9H205 316 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 DNPEPQ9ULA0 475 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PLAAQ9Y263 795 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 RPS6KL1Q9Y6S9 549 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SHANK1Q9Y566 2161 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 RGSL1A5PLK6 1076 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 GOLGA6L3A6NEY3 463 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KIF1CO43896 1103 aaKnown RBP14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TIAF1O95411 115 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 JCHAINP01591 159 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PIRTP0C851 137 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 GALNT3Q14435 633 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CCDC122Q5T0U0 273 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TIGD7Q6NT04 549 aaPredicted RBP14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TMEM135Q86UB9 458 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PLD5Q8N7P1 536 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 RSC1A1Q92681 617 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SYN2Q92777 582 aaPredicted RBP14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KIAA1143Q96AT1 154 aaPredicted RBP14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 MIB2Q96AX9 1013 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PSMG3-AS1Q96PY0 264 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 MLPHQ9BV36 600 aaPredicted RBP14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TRIT1Q9H3H1 467 aaKnown RBP14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 EPB41L1Q9H4G0 881 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KLC4Q9NSK0 619 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 NFKBIL1Q9UBC1 381 aaPredicted RBP14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TP53TG5Q9Y2B4 290 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 MAN2B2Q9Y2E5 1009 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TTLL3Q9Y4R7 772 aa14.15□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SPTBP11277 2137 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 RP1L1Q8IWN7 2480 aaPredicted RBP14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 A0A1W2PQJ5 194 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 C3orf70A6NLC5 250 aaPredicted RBP14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 OR5K4A6NMS3 321 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MYO1FO00160 1098 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PDGFAP04085 211 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TYRP1P17643 537 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TCN2P20062 427 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CD97P48960 835 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 DCDC1P59894 354 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 IFI35P80217 286 aaPredicted RBP14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PPIDQ08752 370 aaKnown RBP14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TDRD12Q587J7 1177 aaKnown RBP14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 C16orf46Q6P387 395 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TMC3Q7Z5M5 1100 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PLXDC1Q8IUK5 500 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ESX1Q8N693 406 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GALNT6Q8NCL4 622 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 RAPGEF5Q92565 580 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 EFHD1Q9BUP0 239 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ZMYND15Q9H091 742 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ZNF768Q9H5H4 540 aaKnown RBP14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 AKIRIN1Q9H9L7 192 aaPredicted RBP14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TRIM39Q9HCM9 518 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PKD2L2Q9NZM6 624 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SEMA5BQ9P283 1151 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CROTQ9UKG9 612 aa14.14□□□□□ -0.15
CHMP4BP1-201ENST00000556017 AURKAO14965 403 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MTX2O75431 263 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 UBXN7O94888 489 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PROSCO94903 275 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SERPING1P05155 500 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CA5AP35218 305 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GJC1P36383 396 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 DLSTP36957 453 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SEPHS1P49903 392 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PPP1CAP62136 330 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 LAMB3Q13751 1172 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PDK2Q15119 407 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PLA2G4EQ3MJ16 856 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 LACTB2Q53H82 288 aaPredicted RBP14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ALS2CLQ60I27 953 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ALKBH5Q6P6C2 394 aaKnown RBP14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CRTC3Q6UUV7 619 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ABRAXAS1Q6UWZ7 409 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 KDELC2Q7Z4H8 507 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 LURAP1LQ8IV03 231 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CCDC13Q8IYE1 715 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 KLHL6Q8WZ60 621 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GLYATL1Q969I3 302 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 IMP4Q96G21 291 aaKnown RBP14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 RNF157Q96PX1 679 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 PACSIN1Q9BY11 444 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 CEP41Q9BYV8 373 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ULBP3Q9BZM4 244 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 ZFYVE1Q9HBF4 777 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SLC40A1Q9NP59 571 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SHOC2Q9UQ13 582 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 WDR37Q9Y2I8 494 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SPO11Q9Y5K1 396 aa14.13□□□□□ -0.15
CHMP4BP1-201ENST00000556017 OR52A4PA6NMU1 304 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 TOX3O15405 576 aaPredicted RBP14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 MTSS1O43312 755 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 KIAA0754O94854 1291 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SLC25A14O95258 325 aaPredicted RBP14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 FGF5P12034 268 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 GP1BBP13224 206 aa14.12□□□□□ -0.15
CHMP4BP1-201ENST00000556017 SLC2A4P14672 509 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms