RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 THAP5Q7Z6K1 395 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 UNC5BQ8IZJ1 945 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 XXYLT1Q8NBI6 393 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 SMG8Q8ND04 991 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 BCL7CQ8WUZ0 217 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 FYTTD1Q96QD9 318 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 ZNF300Q96RE9 604 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 TWNKQ96RR1 684 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 CPXM1Q96SM3 734 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 LPIN3Q9BQK8 851 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 GATA5Q9BWX5 397 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 ZFP14Q9HCL3 533 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 TM9SF3Q9HD45 589 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 RANGRFQ9HD47 186 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 TAS2R9Q9NYW1 312 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 HSPBP1Q9NZL4 362 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PDE10AQ9Y233 779 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 RAP2CQ9Y3L5 183 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 CASP8AP2Q9UKL3 1982 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 CCDC78A2IDD5 438 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 AQP12BA6NM10 295 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 G3V2L1 256 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 H3BMM5 538 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 TFEBP19484 476 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 NKX3-2P78367 333 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 MGAT3Q09327 533 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 LAMTOR4Q0VGL1 99 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 CAPSQ13938 189 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 TAF12Q16514 161 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 SMTNL2Q2TAL5 461 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PNCKQ6P2M8 343 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 TBPL2Q6SJ96 375 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PLEKHM3Q6ZWE6 761 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PHF13Q86YI8 300 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 AQP12AQ8IXF9 295 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 MPP5Q8N3R9 675 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 CPA6Q8N4T0 437 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 ANKRD49Q8WVL7 239 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PPP1R16BQ96T49 567 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PI4K2AQ9BTU6 479 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 ST6GALNAC4Q9H4F1 302 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 ANKHQ9HCJ1 492 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 IARS2Q9NSE4 1012 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PAK1IP1Q9NWT1 392 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 OPTCQ9UBM4 332 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PCSK1NQ9UHG2 260 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PNMA8BQ9ULN7 279 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 SNX7Q9UNH6 387 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 DIMT1Q9UNQ2 313 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 MAN2B2Q9Y2E5 1009 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 COQ4Q9Y3A0 265 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 IPPQ9Y573 584 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 NRCAMQ92823 1304 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 HMX3A6NHT5 357 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 TRIM13O60858 407 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 ATG13O75143 517 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 CYP2A6P11509 494 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 GABARAPL2P60520 117 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 DBPQ10586 325 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 GPR50Q13585 617 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 MFSD13AQ14CX5 517 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 DARS2Q6PI48 645 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 TAS1R3Q7RTX0 852 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 P2RY8Q86VZ1 359 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 RNF149Q8NC42 400 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 TRPV3Q8NET8 790 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 OR4M2Q8NGB6 313 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 SPATA18Q8TC71 538 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 FAR1Q8WVX9 515 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 MYRFLQ96LU7 910 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 MCEEQ96PE7 176 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 GAD1Q99259 594 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 UCK2Q9BZX2 261 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 CCDC90BQ9GZT6 254 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 ZNF556Q9HAH1 456 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 SNX15Q9NRS6 342 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 POLR3BQ9NW08 1133 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 ARHGAP28Q9P2N2 729 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 OSGIN1Q9UJX0 560 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 TBX20Q9UMR3 447 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 MAGEB16A2A368 324 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 RRN3P2A6NIE6 340 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 CAPN5O15484 640 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 TREHO43280 583 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 KPNA6O60684 536 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 SRP72O76094 671 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 PIGNO95427 931 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 LTFP02788 710 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 VTNP04004 478 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 HOXB1P14653 301 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 TYK2P29597 1187 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 TGFBR1P36897 503 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 LBX1P52954 281 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 ROR1Q01973 937 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 PDK2Q15119 407 aa9.4□□□□□ -0.9
CTNNA1-243ENST00000540387 C6orf141Q5SZD1 244 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms