RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 FOXM1Q08050 763 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 CDC37Q16543 378 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 ATP13A5Q4VNC0 1218 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 C10orf25Q5T742 122 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 FRG2Q64ET8 278 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 DUS1LQ6P1R4 473 aaKnown RBP5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 TEX38Q6PEX7 206 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 RD3Q7Z3Z2 195 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 CENPVQ7Z7K6 275 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 BEST3Q8N1M1 668 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 RASGEF1CQ8N431 466 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 AADATQ8N5Z0 425 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 IQUBQ8NA54 791 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 PRSS3P2Q8NHM4 247 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 LPAR1Q92633 364 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 ORAI1Q96D31 301 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 GRAMD2BQ96HH9 432 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 LRFN5Q96NI6 719 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 NEK1Q96PY6 1258 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 FAM234AQ9H0X4 552 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 RAD21L1Q9H4I0 556 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 CATSPERBQ9H7T0 1116 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 NOL11Q9H8H0 719 aaKnown RBP5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 SIRT3Q9NTG7 399 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 ING1Q9UK53 422 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 LIPGQ9Y5X9 500 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 POMT1Q9Y6A1 747 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 TOPBP1Q92547 1522 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZNF608Q9ULD9 1512 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 I6L893 689 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 SPINT2O43291 252 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 MOSPD3O75425 235 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 EPN2O95208 641 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 CELF2O95319 508 aaKnown RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 NUDT3O95989 172 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 NAGAP17050 411 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 ACHEP22303 614 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 NMBRP28336 390 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 STX2P32856 288 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 CTTNQ14247 550 aaKnown RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 GPR18Q14330 331 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZNF273Q14593 569 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 MVPQ14764 893 aaKnown RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 MEP1AQ16819 746 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 MPP7Q5T2T1 576 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 LCN10Q6JVE6 187 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 KCTD18Q6PI47 426 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 Q6ZSV7 163 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 AFAP1Q8N556 730 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 MIGA1Q8NAN2 632 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 MSANTD4Q8NCY6 345 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 CRAMP1Q96RY5 1269 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 SMC6Q96SB8 1091 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 TMEM79Q9BSE2 394 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 WDR26Q9H7D7 661 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 COPS7BQ9H9Q2 264 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 KRCC1Q9NPI7 259 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 TUBA8Q9NY65 449 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 IL36RNQ9UBH0 155 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 TMEM184BQ9Y519 407 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 SNX5Q9Y5X3 404 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 COX11Q9Y6N1 276 aa5.25□□□□□ -1.57
HMGB1P3-201ENST00000502802 CCDC188H7C350 402 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 TIMM23O14925 209 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 NDUFS4O43181 175 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZNF217O75362 1048 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 BDKRB2P30411 391 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 PCGF2P35227 344 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 TCF7P36402 384 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 APOBEC1P41238 236 aaKnown RBP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 GDF5P43026 501 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 FASLGP48023 281 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 PPIGQ13427 754 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 PTPRCAPQ14761 206 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 E2F5Q15329 346 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 TRIP6Q15654 476 aaKnown RBP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 EFNB3Q15768 340 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 DECR1Q16698 335 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 SYT16Q17RD7 645 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 Q4G0T1 1027 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 MANEAQ5SRI9 462 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 KRT39Q6A163 491 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 SLC36A4Q6YBV0 504 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 CCDC91Q7Z6B0 441 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 CTU1Q7Z7A3 348 aaKnown RBP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZC3HC1Q86WB0 502 aaKnown RBP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 NRROSQ86YC3 692 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 MFN1Q8IWA4 741 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 FOXRED2Q8IWF2 684 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZNF595Q8IYB9 648 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 CCAR2Q8N163 923 aaKnown RBP5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 NUP93Q8N1F7 819 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 TMCO5AQ8N6Q1 288 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 EMC1Q8N766 993 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 TAAR8Q969N4 342 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 NXNL1Q96CM4 212 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 COQ8BQ96D53 544 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 GFI1Q99684 422 aa5.24□□□□□ -1.57
HMGB1P3-201ENST00000502802 SEMA3CQ99985 751 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms