RNA–Protein interactions for RNA: ENST00000492337.5

SOX2-OT-213, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 2,508 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-213ENST00000492337 ERVK-8P63133 956 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 NKX3-2P78367 333 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 ECT2LQ008S8 904 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 RAD51Q06609 339 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 EFEMP1Q12805 493 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 GRSF1Q12849 480 aaKnown RBP eCLIP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 GALNT3Q14435 633 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 CBX2Q14781 532 aaPredicted RBP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 TSNQ15631 228 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 CRY1Q16526 586 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 NFE2Q16621 373 aaPredicted RBP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 SDHAF4Q5VUM1 108 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 AFTPHQ6ULP2 937 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 RIMKLAQ8IXN7 391 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 NKAPQ8N5F7 415 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 OR2T11Q8NH01 316 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 DNAJB14Q8TBM8 379 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 PNPT1Q8TCS8 783 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 VPS33AQ96AX1 596 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 TUBA1CQ9BQE3 449 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 RPF2Q9H7B2 306 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 SEMA4BQ9NPR2 832 aaPredicted RBP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 OLA1Q9NTK5 396 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 ABI2Q9NYB9 513 aaPredicted RBP10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 CDC14AQ9UNH5 594 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 TIMM22Q9Y584 194 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 CHD5Q8TDI0 1954 aa10.02□□□□□ -0.81
SOX2-OT-213ENST00000492337 FAM234BA2RU67 622 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 H0Y858 1186 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 B4GALT3O60512 393 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 CPNE6O95741 557 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 SERPINF2P08697 491 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 PRSS56P0CW18 603 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 IL12AP29459 219 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 STT3AP46977 705 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 HLCSP50747 726 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 UFM1P61960 85 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 RING1Q06587 406 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 DSC1Q08554 894 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 PMS2P3Q13401 168 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 DDR2Q16832 855 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 NANOGP8Q6NSW7 305 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 Q6ZNX1 250 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 PDPRQ8NCN5 879 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 TRPV1Q8NER1 839 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 OSCP1Q8WVF1 389 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 MYEOVQ96EZ4 313 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 PHF12Q96QT6 1004 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 ADAM2Q99965 735 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 TRIM8Q9BZR9 551 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 NANOGQ9H9S0 305 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 CXorf21Q9HAI6 301 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 TLR9Q9NR96 1032 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 TBCCD1Q9NVR7 557 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 CCDC154A6NI56 674 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 H3BMQ9 156 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 CDC7O00311 574 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 UPK1AO00322 258 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 ARNTLO00327 626 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 ATE1O95260 518 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 LDLRP01130 860 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 HOXD9P28356 352 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 POLR2JP52435 117 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 ZNF235Q14590 738 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 RAB39AQ14964 217 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 NADSYN1Q6IA69 706 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 UGT3A1Q6NUS8 523 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 CXCL17Q6UXB2 119 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 ZFAND4Q86XD8 727 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 PROKR1Q8TCW9 393 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 CYGBQ8WWM9 190 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 BIRC7Q96CA5 298 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 NSMCE3Q96MG7 304 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 COG8Q96MW5 612 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 LRRC3Q9BY71 257 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 ZFYVE28Q9HCC9 887 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 HEBP1Q9NRV9 189 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 DNAAF2Q9NVR5 837 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 TMEM9Q9P0T7 183 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 SLAMF8Q9P0V8 285 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 PCDHB3Q9Y5E6 796 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 SPO11Q9Y5K1 396 aa10.01□□□□□ -0.81
SOX2-OT-213ENST00000492337 SNX2O60749 519 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 PFDN1O60925 122 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 SOAT2O75908 522 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 CLIC3O95833 236 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 TBX18O95935 607 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 INHBBP09529 407 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 CDH1P12830 882 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 JUNBP17275 347 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-213ENST00000492337 OR1E1P30953 314 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 FMO4P31512 558 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 ENTPD1P49961 510 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 HK3P52790 923 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 CACNB2Q08289 660 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-213ENST00000492337 TAF1AQ15573 450 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-213ENST00000492337 PYCR3Q53H96 274 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 GNASQ5JWF2 1037 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 C6orf136Q5SQH8 315 aa10□□□□□ -0.81
SOX2-OT-213ENST00000492337 CCNYL2Q5T2Q4 361 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms