RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 NUAK1O60285 661 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 SEMA7AO75326 666 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 UBXN7O94888 489 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 VIPP01282 170 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 GZMAP12544 262 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 ATP1A3P13637 1013 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 ZNF8P17098 575 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-206ENST00000483030 XRCC1P18887 633 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-206ENST00000483030 CES1P23141 567 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 CASP14P31944 242 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 SERPINB6P35237 376 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 PCK1P35558 622 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 SLC19A1P41440 591 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 SPINT3P49223 89 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 SEMA5AQ13591 1074 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 DNASE1L3Q13609 305 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 IL11RAQ14626 422 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 CACHD1Q5VU97 1274 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 LRRC49Q8IUZ0 686 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 PHYKPLQ8IUZ5 450 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 APLFQ8IW19 511 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-206ENST00000483030 RAVER1Q8IY67 606 aaKnown RBP7.28□□□□□ -1.24
CSDE1-206ENST00000483030 AOPEPQ8N6M6 819 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 AVL9Q8NBF6 648 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 LPCAT1Q8NF37 534 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 SSC4DQ8WTU2 575 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 ZNF653Q96CK0 615 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 TRIM55Q9BYV6 548 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 POLR1EQ9GZS1 481 aaKnown RBP7.28□□□□□ -1.24
CSDE1-206ENST00000483030 OR2AG1Q9H205 316 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 CARD9Q9H257 536 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 HAUS4Q9H6D7 363 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 AKIRIN1Q9H9L7 192 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-206ENST00000483030 UCK1Q9HA47 277 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 PCDH18Q9HCL0 1135 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 KLC4Q9NSK0 619 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 RBM22Q9NW64 420 aaKnown RBP eCLIP7.28□□□□□ -1.24
CSDE1-206ENST00000483030 ZNF624Q9P2J8 865 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-206ENST00000483030 SLC23A2Q9UGH3 650 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 DNPEPQ9ULA0 475 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 TTLL3Q9Y4R7 772 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 PCDHGA6Q9Y5G7 932 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 A1L4Q6 167 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 PDZK1P1A8MUH7 402 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 DDX3XO00571 662 aaKnown RBP eCLIP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 MATN3O15232 486 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 TOX3O15405 576 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 SLC25A14O95258 325 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 RECKO95980 971 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 RNF224P0DH78 156 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 FGF5P12034 268 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 IL4RP24394 825 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 GARSP41250 739 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 ZNF165P49910 485 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 CCL11P51671 97 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 CLCNKAP51800 687 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 RPL26P61254 145 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 NIPAL4Q0D2K0 466 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 CHAF1BQ13112 559 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 KRT81Q14533 505 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 SEPT7Q16181 437 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 ASIC2Q16515 512 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 QPCTQ16769 361 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 NADK2Q4G0N4 442 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 TDRD12Q587J7 1177 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 ANKRD20A8PQ5CZ79 823 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 CCDC122Q5T0U0 273 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 HENMT1Q5T8I9 393 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 ALS2CLQ60I27 953 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 IRGCQ6NXR0 463 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 CRTC3Q6UUV7 619 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 FAM92BQ6ZTR7 304 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 APTXQ7Z2E3 356 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 ZNF571Q7Z3V5 609 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 PPP1R3BQ86XI6 285 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 TRIM48Q8IWZ4 208 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 ARRDC2Q8TBH0 407 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 CCHCR1Q8TD31 782 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 CT55Q8WUE5 264 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 LRRN4Q8WUT4 740 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 KLHL6Q8WZ60 621 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 MAML1Q92585 1016 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 RSC1A1Q92681 617 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 LYSMD1Q96S90 227 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 RUFY1Q96T51 708 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 MLPHQ9BV36 600 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 SPATA16Q9BXB7 569 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 TDRD1Q9BXT4 1180 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 ACTL8Q9H568 366 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 ZNF768Q9H5H4 540 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 PCDH9Q9HC56 1237 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 TRIM39Q9HCM9 518 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 MRPL47Q9HD33 250 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 LHX9Q9NQ69 397 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 DTLQ9NZJ0 730 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 PKD2L2Q9NZM6 624 aa7.27□□□□□ -1.25
CSDE1-206ENST00000483030 RCOR3Q9P2K3 495 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 RPL26L1Q9UNX3 145 aaKnown RBP7.27□□□□□ -1.25
CSDE1-206ENST00000483030 DNAJC16Q9Y2G8 782 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms