RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 WEE2P0C1S8 567 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 ZNF806P0C7X5 589 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 DHRS4L1P0CG22 281 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 ZNF286BP0CG31 522 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 SMIM10L2AP0DMW4 78 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 SMIM10L2BP0DMW5 78 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 GHRP10912 638 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 SCG2P13521 617 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 MCCP23508 829 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 ARRB2P32121 409 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 SELENOVP59797 346 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 BYSLQ13895 437 aaKnown RBP4.82□□□□□ -1.64
VPS50-214ENST00000477935 SIM2Q14190 667 aaPredicted RBP4.82□□□□□ -1.64
VPS50-214ENST00000477935 SYTL3Q4VX76 610 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 SBK1Q52WX2 424 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 FBXO47Q5MNV8 452 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 STPG1Q5TH74 334 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 DCAF12L2Q5VW00 463 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 TMEM71Q6P5X7 295 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 CTR9Q6PD62 1173 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 Q6ZTK2 550 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 WDR5BQ86VZ2 330 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 TMEM57Q8N5G2 664 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 HORMAD2Q8N7B1 307 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 COLGALT1Q8NBJ5 622 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 BICD2Q8TD16 824 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 HDAC7Q8WUI4 952 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 CLDN23Q96B33 292 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 TBC1D20Q96BZ9 403 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 SPATA33Q96N06 139 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 RANBP17Q9H2T7 1088 aaKnown RBP4.82□□□□□ -1.64
VPS50-214ENST00000477935 PPCSQ9HAB8 311 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 KRCC1Q9NPI7 259 aaPredicted RBP4.82□□□□□ -1.64
VPS50-214ENST00000477935 PRMT8Q9NR22 394 aaPredicted RBP4.82□□□□□ -1.64
VPS50-214ENST00000477935 TLR8Q9NR97 1041 aaKnown RBP4.82□□□□□ -1.64
VPS50-214ENST00000477935 NCKIPSDQ9NZQ3 722 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 CDH22Q9UJ99 828 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 ICKQ9UPZ9 632 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 NEUROG3Q9Y4Z2 214 aa4.82□□□□□ -1.64
VPS50-214ENST00000477935 ZFP37Q9Y6Q3 630 aaPredicted RBP4.82□□□□□ -1.64
VPS50-214ENST00000477935 MORC2Q9Y6X9 1032 aaPredicted RBP4.82□□□□□ -1.64
VPS50-214ENST00000477935 HECTD1Q9ULT8 2610 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 CYSRT1A8MQ03 144 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 BECN2A8MW95 431 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 STMND1H3BQB6 276 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 PIP5K1CO60331 668 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 CXCL14O95715 111 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 CEACAM1P13688 526 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 ARSBP15848 533 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 RXRAP19793 462 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 CDKN2AP42771 156 aaKnown RBP4.81□□□□□ -1.64
VPS50-214ENST00000477935 ENTPD1P49961 510 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 GPR18Q14330 331 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 ADCK5Q3MIX3 580 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 HSDL1Q3SXM5 330 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 CTXN3Q4LDR2 81 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 CELF3Q5SZQ8 465 aaKnown RBP4.81□□□□□ -1.64
VPS50-214ENST00000477935 TMEM268Q5VZI3 342 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 LSM14AQ8ND56 463 aaKnown RBP4.81□□□□□ -1.64
VPS50-214ENST00000477935 OIT3Q8WWZ8 545 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 PPP1R10Q96QC0 940 aaKnown RBP4.81□□□□□ -1.64
VPS50-214ENST00000477935 TEFMQ96QE5 360 aaKnown RBP4.81□□□□□ -1.64
VPS50-214ENST00000477935 MYADMQ96S97 322 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 HNRNPABQ99729 332 aaKnown RBP4.81□□□□□ -1.64
VPS50-214ENST00000477935 SF3B5Q9BWJ5 86 aaKnown RBP4.81□□□□□ -1.64
VPS50-214ENST00000477935 ITM2CQ9NQX7 267 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 SETD4Q9NVD3 440 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 SPG21Q9NZD8 308 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 STK39Q9UEW8 545 aa4.81□□□□□ -1.64
VPS50-214ENST00000477935 DBNLQ9UJU6 430 aaKnown RBP4.81□□□□□ -1.64
VPS50-214ENST00000477935 ZNF215Q9UL58 517 aaPredicted RBP4.81□□□□□ -1.64
VPS50-214ENST00000477935 ZBED9Q6R2W3 1325 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 WDR19Q8NEZ3 1342 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 SAC3D1A6NKF1 404 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 ANHXE9PGG2 379 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 IFRD1O00458 451 aaPredicted RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 PRKAB2O43741 272 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 LCATP04180 440 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 CYP1A2P05177 515 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 LAMP2P13473 410 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 CPA1P15085 419 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 TKTP29401 623 aaKnown RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 HOXA11P31270 313 aaPredicted RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 CD52P31358 61 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 CCKARP32238 428 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 RDXP35241 583 aaKnown RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 GJC1P36383 396 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 MTNR1AP48039 350 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 PPP3CCP48454 512 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 NOVA1P51513 510 aaKnown RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 CLCNKBP51801 687 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 ARL4CP56559 192 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 ROR2Q01974 943 aaKnown RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 MGAT3Q09327 533 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 TRAF1Q13077 416 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 IL13RA2Q14627 380 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 MLF2Q15773 248 aaPredicted RBP4.8□□□□□ -1.64
VPS50-214ENST00000477935 LPAL2Q16609 132 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 AP5B1Q2VPB7 878 aa4.8□□□□□ -1.64
VPS50-214ENST00000477935 ALDH1L2Q3SY69 923 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms