RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SH3KBP1Q96B97 665 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 ZNF653Q96CK0 615 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 STAMBPL1Q96FJ0 436 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 TCTN2Q96GX1 697 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 ERGIC2Q96RQ1 377 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 HERPUD2Q9BSE4 406 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 TDRD1Q9BXT4 1180 aaKnown RBP12.43□□□□□ -0.42
TRAF4-209ENST00000473421 NUP62CLQ9H1M0 184 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 OR2AG1Q9H205 316 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 OSGEPL1Q9H4B0 414 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 ACTL8Q9H568 366 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 MLXIPLQ9NP71 852 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 LHX9Q9NQ69 397 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 MYO1AQ9UBC5 1043 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 LIMA1Q9UHB6 759 aaKnown RBP12.43□□□□□ -0.42
TRAF4-209ENST00000473421 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 DNAJC16Q9Y2G8 782 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 PCDHGA6Q9Y5G7 932 aa12.43□□□□□ -0.42
TRAF4-209ENST00000473421 IGHV5-51A0A0C4DH38 117 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 KIR2DS5A0A0G2JLQ3 304 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 A0A0G2JNG1 304 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 C1orf232A0A0U1RR37 186 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 GOLGA6L3A6NEY3 463 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 KIR2DS3K7RE56 304 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 MFSD11O43934 449 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 MMP2P08253 660 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 ZNF30P17039 623 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 RPL10P27635 214 aaKnown RBP12.42□□□□□ -0.42
TRAF4-209ENST00000473421 EPHB1P54762 984 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 CDH6P55285 790 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 KIR2DS5Q14953 304 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 QPCTQ16769 361 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 ATP13A4Q4VNC1 1196 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 RALGPS1Q5JS13 557 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 ALS2CLQ60I27 953 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 ALG1LQ6GMV1 187 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 LCN10Q6JVE6 187 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 ADGRG6Q86SQ4 1221 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 ZNF547Q8IVP9 402 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 APLFQ8IW19 511 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-209ENST00000473421 Q8NA96 180 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 GPR26Q8NDV2 337 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 KLHL6Q8WZ60 621 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-209ENST00000473421 FAM83DQ9H4H8 585 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 CASS4Q9NQ75 786 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 TRIM10Q9UDY6 481 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 KCND3Q9UK17 655 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 TMPRSS11EQ9UL52 423 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 PADI1Q9ULC6 663 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 WDR37Q9Y2I8 494 aa12.42□□□□□ -0.42
TRAF4-209ENST00000473421 SPTBP11277 2137 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 LRRC10BA6NIK2 292 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 ARGFXA6NJG6 315 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 RASSF9O75901 435 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 HLA-DQB2P05538 268 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 PIRTP0C851 137 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 ATP1A3P13637 1013 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 FERP16591 822 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 AMD1P17707 334 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 XRCC1P18887 633 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-209ENST00000473421 PCK1P35558 622 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 ARL4AP40617 200 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 CCL11P51671 97 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 DRG2P55039 364 aaKnown RBP12.41□□□□□ -0.42
TRAF4-209ENST00000473421 GPR18Q14330 331 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 IL11RAQ14626 422 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 PRAMEF17Q5VTA0 474 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 CACHD1Q5VU97 1274 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 AOPEPQ8N6M6 819 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 SLC38A9Q8NBW4 561 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 MAML1Q92585 1016 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 C19orf60Q96EN9 201 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 LYSMD1Q96S90 227 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 MFRPQ9BY79 579 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 CARD9Q9H257 536 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 HAUS4Q9H6D7 363 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 PCDH9Q9HC56 1237 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 RBM22Q9NW64 420 aaKnown RBP eCLIP12.41□□□□□ -0.422e-8■□□□□ 8.6
TRAF4-209ENST00000473421 TTLL3Q9Y4R7 772 aa12.41□□□□□ -0.42
TRAF4-209ENST00000473421 LRRC53A6NM62 1247 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 CHUKO15111 745 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 DDX3YO15523 660 aaKnown RBP12.4□□□□□ -0.42
TRAF4-209ENST00000473421 KRT86O43790 486 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 VIPP01282 170 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 SKILP12757 684 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 NFKBIAP25963 317 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 CASP14P31944 242 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 CA5AP35218 305 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 DCTP40126 519 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 GARSP41250 739 aaKnown RBP12.4□□□□□ -0.42
TRAF4-209ENST00000473421 ARSEP51690 589 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 CLCNKAP51800 687 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 SLC25A11Q02978 314 aaKnown RBP12.4□□□□□ -0.42
TRAF4-209ENST00000473421 GALNT2Q10471 571 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 SLC10A2Q12908 348 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-209ENST00000473421 INPP5JQ15735 1006 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-209ENST00000473421 TDRD12Q587J7 1177 aaKnown RBP12.4□□□□□ -0.42
TRAF4-209ENST00000473421 NCBP2-AS2Q69YL0 99 aa12.4□□□□□ -0.42
TRAF4-209ENST00000473421 IRGCQ6NXR0 463 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms