RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 VPS18Q9P253 973 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 ZNF624Q9P2J8 865 aaPredicted RBP15.48■□□□□ 0.07
SND1-203ENST00000463020 RCOR3Q9P2K3 495 aaPredicted RBP15.48■□□□□ 0.07
SND1-203ENST00000463020 ATXN10Q9UBB4 475 aa15.48■□□□□ 0.07
SND1-203ENST00000463020 CNOT8Q9UFF9 292 aaKnown RBP15.48■□□□□ 0.07
SND1-203ENST00000463020 LILRA5A6NI73 299 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 LRRC53A6NM62 1247 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 RNF8O76064 485 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 FTLP02792 175 aaPredicted RBP15.47■□□□□ 0.07
SND1-203ENST00000463020 ATP1A3P13637 1013 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 CDH6P55285 790 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 MC1RQ01726 317 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 ITKQ08881 620 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 CHAF1BQ13112 559 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 SEPT6Q14141 434 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 PRR30Q53SZ7 412 aaPredicted RBP15.47■□□□□ 0.07
SND1-203ENST00000463020 SLC9B2Q86UD5 537 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 CCDC13Q8IYE1 715 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 LPCAT1Q8NF37 534 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 CT55Q8WUE5 264 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 RSC1A1Q92681 617 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 ZNF653Q96CK0 615 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 TRIT1Q9H3H1 467 aaKnown RBP15.47■□□□□ 0.07
SND1-203ENST00000463020 MYO1AQ9UBC5 1043 aa15.47■□□□□ 0.07
SND1-203ENST00000463020 TEP1Q99973 2627 aaKnown RBP15.46■□□□□ 0.07
SND1-203ENST00000463020 MKRN2OSH3BPM6 223 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 RFPL1O75677 317 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 NDUFA10O95299 355 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 BRAFP15056 766 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 ZNF30P17039 623 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 SLC19A1P41440 591 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 PMS2P54278 862 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 RPS18P62269 152 aaKnown RBP15.46■□□□□ 0.07
SND1-203ENST00000463020 SLC25A11Q02978 314 aaKnown RBP15.46■□□□□ 0.07
SND1-203ENST00000463020 SEPT7Q16181 437 aaKnown RBP15.46■□□□□ 0.07
SND1-203ENST00000463020 NADK2Q4G0N4 442 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 RALGPS1Q5JS13 557 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 ALG1LQ6GMV1 187 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 CRTC3Q6UUV7 619 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 CERS6Q6ZMG9 384 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 ATCAYQ86WG3 371 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 HERPUD2Q9BSE4 406 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 TWSG1Q9GZX9 223 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 OR2AG1Q9H205 316 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 ZNF768Q9H5H4 540 aaKnown RBP15.46■□□□□ 0.07
SND1-203ENST00000463020 HAUS4Q9H6D7 363 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 KLC4Q9NSK0 619 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 SHANK1Q9Y566 2161 aa15.46■□□□□ 0.07
SND1-203ENST00000463020 KIR2DS5A0A0G2JLQ3 304 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 A0A0G2JNG1 304 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 A1L4Q6 167 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 KIR2DS3K7RE56 304 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 GRID2O43424 1007 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 NUAK1O60285 661 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 HLA-DQB2P05538 268 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 MMP2P08253 660 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 DESP17661 470 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 MAN1A1P33908 653 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 PCK1P35558 622 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 ARL4AP40617 200 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 SPINT3P49223 89 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 EPHB1P54762 984 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 KCNAB1Q14722 419 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 KIR2DS5Q14953 304 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 QPCTQ16769 361 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 KHDC1Q4VXA5 237 aaKnown RBP15.45■□□□□ 0.06
SND1-203ENST00000463020 FAM199XQ6PEV8 388 aaPredicted RBP15.45■□□□□ 0.06
SND1-203ENST00000463020 TMEM26Q6ZUK4 368 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 MAML1Q92585 1016 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 POLR1EQ9GZS1 481 aaKnown RBP15.45■□□□□ 0.06
SND1-203ENST00000463020 OSGEPL1Q9H4B0 414 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 LNPEPQ9UIQ6 1025 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 POLHQ9Y253 713 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 TTLL3Q9Y4R7 772 aa15.45■□□□□ 0.06
SND1-203ENST00000463020 RP1L1Q8IWN7 2480 aaPredicted RBP15.44■□□□□ 0.06
SND1-203ENST00000463020 UQCRHLA0A096LP55 91 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 C1orf232A0A0U1RR37 186 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 PIPSLA2A3N6 862 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 LRRC10BA6NIK2 292 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 OR52A4PA6NMU1 304 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 KIF2AO00139 706 aaPredicted RBP15.44■□□□□ 0.06
SND1-203ENST00000463020 MTX2O75431 263 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 SPAG6O75602 509 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 CREG1O75629 220 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 UBXN7O94888 489 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 AGFG2O95081 481 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 UQCRHP07919 91 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 NFKBIAP25963 317 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 COL8A1P27658 744 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 ZNF135P52742 658 aaPredicted RBP15.44■□□□□ 0.06
SND1-203ENST00000463020 CCZ1BP86790 482 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 CCZ1P86791 482 aaPredicted RBP15.44■□□□□ 0.06
SND1-203ENST00000463020 GALNT2Q10471 571 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 DNASE1L3Q13609 305 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 IL10RAQ13651 578 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 LAMB3Q13751 1172 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 FILIP1LQ4L180 1135 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 ATP13A4Q4VNC1 1196 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 ALS2CLQ60I27 953 aa15.44■□□□□ 0.06
SND1-203ENST00000463020 NCBP2-AS2Q69YL0 99 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms