RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 TDRD12Q587J7 1177 aaKnown RBP9.89□□□□□ -0.83
MDC1-202ENST00000416571 ZNF569Q5MCW4 686 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 CCDC122Q5T0U0 273 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 HENMT1Q5T8I9 393 aaKnown RBP9.89□□□□□ -0.83
MDC1-202ENST00000416571 CACHD1Q5VU97 1274 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 CAPRIN2Q6IMN6 1127 aaKnown RBP9.89□□□□□ -0.83
MDC1-202ENST00000416571 IRGCQ6NXR0 463 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 TMEM26Q6ZUK4 368 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 IRF2BP2Q7Z5L9 587 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 TEX26Q8N6G2 289 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 AOPEPQ8N6M6 819 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 SPATA16Q9BXB7 569 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 OR2AG1Q9H205 316 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 ZNF768Q9H5H4 540 aaKnown RBP9.89□□□□□ -0.83
MDC1-202ENST00000416571 UCK1Q9HA47 277 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 PCDH9Q9HC56 1237 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 PDE7BQ9NP56 450 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 RBM22Q9NW64 420 aaKnown RBP eCLIP9.89□□□□□ -0.837e-8■■□□□ 13.6
MDC1-202ENST00000416571 RCOR3Q9P2K3 495 aaPredicted RBP9.89□□□□□ -0.83
MDC1-202ENST00000416571 MYO6Q9UM54 1294 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 RPL26L1Q9UNX3 145 aaKnown RBP9.89□□□□□ -0.83
MDC1-202ENST00000416571 PCDHGA6Q9Y5G7 932 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 ICE1Q9Y2F5 2266 aa9.89□□□□□ -0.83
MDC1-202ENST00000416571 RGSL1A5PLK6 1076 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 LRRC53A6NM62 1247 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 GPR89AB7ZAQ6 455 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 C21orf140B9A014 251 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 SPAG6O75602 509 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 DNAJB5O75953 348 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 SLC25A14O95258 325 aaPredicted RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 GPR89BP0CG08 455 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 FGF5P12034 268 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 ZNF8P17098 575 aaPredicted RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 SSR1P43307 286 aaKnown RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 CAPZBP47756 277 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 LEPRP48357 1165 aaKnown RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 CLCNKAP51800 687 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 PGDP52209 483 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 UBE2IP63279 158 aaKnown RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 SEMA5AQ13591 1074 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 PIGHQ14442 188 aaPredicted RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 SEPT7Q16181 437 aaKnown RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.88□□□□□ -0.83
MDC1-202ENST00000416571 ALG1LQ6GMV1 187 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 CRTC3Q6UUV7 619 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 FAM92BQ6ZTR7 304 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 TMEM135Q86UB9 458 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 APLFQ8IW19 511 aaPredicted RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 CT55Q8WUE5 264 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 TEKT4Q8WW24 435 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 CXorf40BQ96DE9 158 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 ZDHHC12Q96GR4 267 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 LYSMD1Q96S90 227 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 SYT11Q9BT88 431 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 SLC25A23Q9BV35 468 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 MLPHQ9BV36 600 aaPredicted RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 ACTL8Q9H568 366 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 HAUS4Q9H6D7 363 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 PCDH18Q9HCL0 1135 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 ARFGAP3Q9NP61 516 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 LHX9Q9NQ69 397 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 ACSS2Q9NR19 701 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 POT1Q9NUX5 634 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 OGFRQ9NZT2 677 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 ATXN10Q9UBB4 475 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 AMACRQ9UHK6 382 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 RARRES3Q9UL19 164 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 CNOT6Q9ULM6 557 aaKnown RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 DNAJC16Q9Y2G8 782 aa9.88□□□□□ -0.83
MDC1-202ENST00000416571 TNRC6AQ8NDV7 1962 aaKnown RBP9.88□□□□□ -0.83
MDC1-202ENST00000416571 GOLGA6L3A6NEY3 463 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 KMOO15229 486 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 MATN3O15232 486 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 MFSD11O43934 449 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 PDGFAP04085 211 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 TCF4P15884 667 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 VCLP18206 1134 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 SLC19A1P41440 591 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 ARL4DP49703 201 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 RPS15P62841 145 aaKnown RBP9.87□□□□□ -0.83
MDC1-202ENST00000416571 PDE1BQ01064 536 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 KLHL30Q0D2K2 578 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 TUBB3Q13509 450 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 IFI16Q16666 785 aaKnown RBP9.87□□□□□ -0.83
MDC1-202ENST00000416571 ALS2CLQ60I27 953 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 SASS6Q6UVJ0 657 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 PRSS42Q7Z5A4 293 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 LRRTM4Q86VH4 590 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 RBM12BQ8IXT5 1001 aaKnown RBP9.87□□□□□ -0.83
MDC1-202ENST00000416571 SIDT2Q8NBJ9 832 aaKnown RBP9.87□□□□□ -0.83
MDC1-202ENST00000416571 THAP4Q8WY91 577 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 MAML1Q92585 1016 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 RSC1A1Q92681 617 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 WDR24Q96S15 920 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 ZSCAN5AQ9BUG6 496 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 ADGRE3Q9BY15 652 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 TRIM55Q9BYV6 548 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 BRD8Q9H0E9 1235 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 TRIM39Q9HCM9 518 aa9.87□□□□□ -0.83
MDC1-202ENST00000416571 RAD18Q9NS91 495 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms