RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 NSMCE3Q96MG7 304 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TRAF6Q9Y4K3 522 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 MYH9P35579 1960 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 H3BNH8 94 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 RNASEH2AO75792 299 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SOAT2O75908 522 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CPSF4O95639 269 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MT-ND1P03886 318 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 IQCF3P0C7M6 154 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 XPAP23025 273 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 HOXD12P35452 270 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 KRT20P35900 424 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 AFMIDQ63HM1 303 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 LARP4Q71RC2 724 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CARNMT1Q8N4J0 409 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ADI1Q9BV57 179 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CDHR5Q9HBB8 845 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ANKHQ9HCJ1 492 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 C12orf4Q9NQ89 552 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ZIM2Q9NZV7 527 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CNOT6Q9ULM6 557 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 LOC110117498-PIK3R3F6TDL0 507 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 K7EPI3 171 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 AREL1O15033 823 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 GUCY1B2O75343 617 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ARHGEF15O94989 841 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 AHSGP02765 367 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 HNRNPLP14866 589 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 HOXD10P28358 340 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 HNRNPFP52597 415 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 AARS2Q5JTZ9 985 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TYW3Q6IPR3 259 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SPRED1Q7Z699 444 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 RAB43Q86YS6 212 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 GLB1L3Q8NCI6 653 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MRPL45Q9BRJ2 306 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 B3GNT5Q9BYG0 378 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 HIPK3Q9H422 1215 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SERHL2Q9H4I8 314 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 KLHL31Q9H511 634 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SERHLQ9NQF3 203 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 OLAHQ9NV23 265 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM181Q9P2C4 612 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 PCDHGB4Q9UN71 923 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 GMPPBQ9Y5P6 360 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 A8MT66 165 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM189-UBE2V1I3L0A0 370 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 PGK2P07205 417 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MAGEA11P43364 429 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 WNT3AP56704 352 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ADIGQ0VDE8 80 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF235Q14590 738 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 LY6KQ17RY6 165 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 AKIRIN2Q53H80 203 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TSTD2Q5T7W7 516 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 USP51Q70EK9 711 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 THAP5Q7Z6K1 395 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CUZD1Q86UP6 607 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SLC41A1Q8IVJ1 513 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 C12orf29Q8N999 325 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 UXS1Q8NBZ7 420 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 GALNT6Q8NCL4 622 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 IMP4Q96G21 291 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MRPL39Q9NYK5 338 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CCDC59Q9P031 241 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MAGEL2Q9UJ55 1249 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 PKP3Q9Y446 797 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 RLFQ13129 1914 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 A0A1W2PP18 115 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 NPIPB8E9PQR5 432 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 EIF3FO00303 357 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 HTRA2O43464 458 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CNMDO75829 334 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CNPP09543 421 aaKnown RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TSPAN8P19075 237 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 GRIK1P39086 918 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 HALP42357 657 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MAPKAPK2P49137 400 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CLCN4P51793 760 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MGAT5BQ3V5L5 792 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SPDYE7PQ495Y7 208 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MARCH8Q5T0T0 291 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 SLC22A16Q86VW1 577 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 C2orf69Q8N8R5 385 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 STAG3L4Q8TBR4 150 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 RAB2BQ8WUD1 216 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 APBA2Q99767 749 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 ELOVL6Q9H5J4 265 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CHRAC1Q9NRG0 131 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 AGPAT4Q9NRZ5 378 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 KRT84Q9NSB2 600 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MKL2Q9ULH7 1088 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 CXorf51AA0A1B0GTR3 108 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 FAM92AA1XBS5 289 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 LCHNA4D1U4 455 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 TK2O00142 265 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 NDUFS3O75489 264 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 RECQL5O94762 991 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-205ENST00000397611 MYF6P23409 242 aa5.41□□□□□ -1.54
PTPRD-205ENST00000397611 GABRB3P28472 473 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms