RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CCDC195A0A1B0GUA6 201 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 CXorf49A8MYA2 514 aaPredicted RBP18.88■□□□□ 0.61
CCDC50-202ENST00000392456 B8ZZF3 427 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 TBL1XO60907 577 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 TGDSO95455 350 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 ALOX5P09917 674 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 CD247P20963 164 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 GABRB3P28472 473 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 EPHA5P54756 1037 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 C6orf52Q5T4I8 152 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 MARC1Q5VT66 337 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 CASC4Q6P4E1 433 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 GPR141Q7Z602 305 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 ELMOD2Q8IZ81 293 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 GALNT6Q8NCL4 622 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 TP53INP1Q96A56 240 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 ZNF707Q96C28 371 aaPredicted RBP18.88■□□□□ 0.61
CCDC50-202ENST00000392456 FCRL5Q96RD9 977 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 SMYD2Q9NRG4 433 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 CHD5Q8TDI0 1954 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 TRAV19A0A0A6YYK7 116 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 M0QX08 132 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 LEFTY2O00292 366 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 CCRL2O00421 344 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 PMPCBO75439 489 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 CLDN11O75508 207 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 PRKACAP17612 351 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 CPOXP36551 454 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 YBEYP58557 167 aaPredicted RBP18.88■□□□□ 0.61
CCDC50-202ENST00000392456 KDSRQ06136 332 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 C19orf57Q0VDD7 668 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 PPP4R4Q6NUP7 873 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 IPMKQ8NFU5 416 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 ACSS3Q9H6R3 686 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 PDFQ9HBH1 243 aa18.88■□□□□ 0.61
CCDC50-202ENST00000392456 A0A1B0GVM2 712 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 TCAF2A6NFQ2 919 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 SDR42E2A6NKP2 422 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 PRAMEF11O60813 436 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 MLNP12872 115 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 RENBPP51606 427 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 IL31Q6EBC2 164 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 TPGS1Q6ZTW0 290 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 GALNT7Q86SF2 657 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 ALYREFQ86V81 257 aaKnown RBP18.87■□□□□ 0.61
CCDC50-202ENST00000392456 TICAM1Q8IUC6 712 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 CLIP4Q8N3C7 705 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 MINDY2Q8NBR6 621 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 ING5Q8WYH8 240 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 CLPBQ9H078 707 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 RPF2Q9H7B2 306 aaKnown RBP18.87■□□□□ 0.61
CCDC50-202ENST00000392456 ATPIF1Q9UII2 106 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 PRUNE2Q8WUY3 3088 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 MYOFQ9NZM1 2061 aa18.87■□□□□ 0.61
CCDC50-202ENST00000392456 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.86■□□□□ 0.61
CCDC50-202ENST00000392456 C1RP00736 705 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 NR4A2P43354 598 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 DSC2Q02487 901 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 IL10RBQ08334 325 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 ITKQ08881 620 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 BNIP3Q12983 259 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 ZNF177Q13360 481 aaPredicted RBP18.86■□□□□ 0.61
CCDC50-202ENST00000392456 KLHL38Q2WGJ6 581 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 ANKRD26P1Q6NSI1 321 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 TMC5Q6UXY8 1006 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 CARNMT1Q8N4J0 409 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 TEX26Q8N6G2 289 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 DNAAF3Q8N9W5 541 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 VN1R2Q8NFZ6 395 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 SH3RF2Q8TEC5 729 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 CASS4Q9NQ75 786 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 CDH22Q9UJ99 828 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 APOBEC2Q9Y235 224 aaKnown RBP18.86■□□□□ 0.61
CCDC50-202ENST00000392456 FAM155BO75949 473 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 BMP10O95393 424 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 PRAMEF12O95522 483 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 MMP2P08253 660 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 CHRNA4P43681 627 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 CDKL1Q00532 357 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 ANO4Q32M45 955 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 ZBED5Q49AG3 693 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 RNF219Q5W0B1 726 aaPredicted RBP18.86■□□□□ 0.61
CCDC50-202ENST00000392456 DENND5AQ6IQ26 1287 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 CCBE1Q6UXH8 406 aaPredicted RBP18.86■□□□□ 0.61
CCDC50-202ENST00000392456 PRR23CQ6ZRP0 262 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 HTR3DQ70Z44 454 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 KLHDC8BQ8IXV7 354 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 CMTM8Q8IZV2 173 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 PQLC1Q8N2U9 271 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 SLC29A1Q99808 456 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 MAGEH1Q9H213 219 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 SLC17A6Q9P2U8 582 aa18.86■□□□□ 0.61
CCDC50-202ENST00000392456 FAM172BPA6NC97 362 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 RHOCP08134 193 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 MYL2P10916 166 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 NRIP1P48552 1158 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 PHC1P78364 1004 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 LYSMD3Q7Z3D4 306 aa18.85■□□□□ 0.61
CCDC50-202ENST00000392456 USP13Q92995 863 aaPredicted RBP18.85■□□□□ 0.61
CCDC50-202ENST00000392456 LRRC39Q96DD0 335 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms