RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ITGALP20701 1170 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 SNRPD1P62314 119 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 PTK2BQ14289 1009 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CRY1Q16526 586 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 PFKFB4Q16877 469 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 TMEM198Q66K66 360 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 HACD2Q6Y1H2 254 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 LARP4Q71RC2 724 aaKnown RBP eCLIP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 LYSMD3Q7Z3D4 306 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 SNX20Q7Z614 316 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 PIANPQ8IYJ0 282 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 HS6ST3Q8IZP7 471 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 RBFAQ8N0V3 343 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CHCHD4Q8N4Q1 142 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 OR2AP1Q8NGE2 309 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CD200R1Q8TD46 325 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 SH3RF2Q8TEC5 729 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 GDPD5Q8WTR4 605 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 RCN3Q96D15 328 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 C19orf60Q96EN9 201 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ZNF570Q96NI8 536 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 LYSMD1Q96S90 227 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 CCT7Q99832 543 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 MRPL1Q9BYD6 325 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ZFYVE1Q9HBF4 777 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 MID1IP1Q9NPA3 183 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 NMRK1Q9NWW6 199 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 NUDT4Q9NZJ9 180 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 EVLQ9UI08 416 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 ZMYM5Q9UJ78 669 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 GNPTGQ9UJJ9 305 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 G3BP2Q9UN86 482 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 FIS1Q9Y3D6 152 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 INSL6Q9Y581 213 aa10.39□□□□□ -0.75
POLR2J3-201ENST00000379340 TRBV5-4A0A0C4DH59 114 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 BBIP1A8MTZ0 92 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 PSMD12O00232 456 aaPredicted RBP10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 BTN3A1O00481 513 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 LIN7AO14910 233 aaPredicted RBP10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 GRM6O15303 877 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 NIPSNAP2O75323 286 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 CDK14O94921 469 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 TSPAN12O95859 305 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 LINC00271P0C7V0 271 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 SPATA31D3P0C874 917 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 CHRM3P20309 590 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 EEF1DP29692 281 aaKnown RBP10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 CDKN1CP49918 316 aaPredicted RBP10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 EPHA5P54756 1037 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 SESN3P58005 492 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 CLCQ05315 142 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 FASTKQ14296 549 aaKnown RBP10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 DMC1Q14565 340 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 UGT3A2Q3SY77 523 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 GPR33Q49SQ1 333 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 ARHGAP15Q53QZ3 475 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 PPM1LQ5SGD2 360 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 GRAMD4Q6IC98 578 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 SPATA31D4Q6ZUB0 917 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 ADAMTSL2Q86TH1 951 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 CAMK1DQ8IU85 385 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 GJD3Q8N144 294 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 PAF1Q8N7H5 531 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 KLHL23Q8NBE8 558 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 LEMD2Q8NC56 503 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 DTX3LQ8TDB6 740 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 ZNF483Q8TF39 744 aaPredicted RBP10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 TWIST2Q8WVJ9 160 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 FUBP1Q96AE4 644 aaKnown RBP10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 LINGO1Q96FE5 620 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 LMLNQ96KR4 655 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 PHOX2BQ99453 314 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 SLC25A23Q9BV35 468 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 TM6SF2Q9BZW4 377 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 CEP44Q9C0F1 390 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 CLPBQ9H078 707 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 WDR41Q9HAD4 459 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 BPIFA1Q9NP55 256 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 SLC25A13Q9UJS0 675 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 DHRS7Q9Y394 339 aa10.38□□□□□ -0.75
POLR2J3-201ENST00000379340 ZNF318Q5VUA4 2279 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 C1orf232A0A0U1RR37 186 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 A0A1W2PRU2 124 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 NPEPPSL1A6NEC2 478 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 GIPC1O14908 333 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 SNX2O60749 519 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 PDE5AO76074 875 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 CHEK2O96017 543 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 MT-CO1P00395 513 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 SNRPB2P08579 225 aaKnown RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 RPSAP08865 295 aaKnown RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 IL9P15248 144 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 CTPS1P17812 591 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 ME2P23368 584 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 SPAM1P38567 509 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 PSMD8P48556 350 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 MRPL19P49406 292 aaKnown RBP10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 RGS4P49798 205 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 CLCN7P51798 805 aa10.37□□□□□ -0.75
POLR2J3-201ENST00000379340 SH3BP2P78314 561 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms