RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 AGPSO00116 658 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 ENPP3O14638 875 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 MYL12BO14950 172 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 HLA-DQB2P05538 268 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 ANGPT1Q15389 498 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 IL23RQ5VWK5 629 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 PPP2R2DQ66LE6 453 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 MSANTD2Q6P1R3 559 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 POMGNT2Q8NAT1 580 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 ZNF461Q8TAF7 563 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 ZFRQ96KR1 1074 aaKnown RBP11.19□□□□□ -0.62
USP6NL-201ENST00000277575 DCUN1D5Q9BTE7 237 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 PNPLA8Q9NP80 782 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 RAB23Q9ULC3 237 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 SAMHD1Q9Y3Z3 626 aaKnown RBP11.19□□□□□ -0.62
USP6NL-201ENST00000277575 DYTNA2CJ06 578 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 CCDC162PA2VCL2 907 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 BBIP1A8MTZ0 92 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 CST1P01037 141 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 PCCBP05166 539 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 ANPEPP15144 967 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 SYN1P17600 705 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 EDNRBP24530 442 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 LRRC73Q5JTD7 316 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 LDLRAD1Q5T700 205 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 TMEM220Q6QAJ8 160 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 TAS1R3Q7RTX0 852 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 OR13C4Q8NGS5 318 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 ESAMQ96AP7 390 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 REXO5Q96IC2 774 aaKnown RBP11.19□□□□□ -0.62
USP6NL-201ENST00000277575 ZNF599Q96NL3 588 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 CNTN6Q9UQ52 1028 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 LYVE1Q9Y5Y7 322 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 GABRDO14764 452 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 SLC1A2P43004 574 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 SMIM11AP58511 58 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 CHIT1Q13231 466 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 C9orf64Q5T6V5 341 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 CTU1Q7Z7A3 348 aaKnown RBP11.19□□□□□ -0.62
USP6NL-201ENST00000277575 GPR135Q8IZ08 494 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 SLCO2A1Q92959 643 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 ZMAT2Q96NC0 199 aaKnown RBP11.19□□□□□ -0.62
USP6NL-201ENST00000277575 TRAPPC9Q96Q05 1148 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 VPS35Q96QK1 796 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 SMOC2Q9H3U7 446 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 ZDHHC18Q9NUE0 388 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 SCML2Q9UQR0 700 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 LRRC72A6NJI9 287 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 SIN3BO75182 1162 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 DLGAP3O95886 979 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 CDC42P60953 191 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 DGCR6Q14129 220 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 INAQ16352 499 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 VITQ6UXI7 678 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.19□□□□□ -0.62
USP6NL-201ENST00000277575 CCDC103Q8IW40 242 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 CENPIQ92674 756 aaPredicted RBP11.19□□□□□ -0.62
USP6NL-201ENST00000277575 NPY6RQ99463 290 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 MCMBPQ9BTE3 642 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 RSPH9Q9H1X1 276 aaPredicted RBP11.19□□□□□ -0.62
USP6NL-201ENST00000277575 NDRG2Q9UN36 371 aaKnown RBP11.19□□□□□ -0.62
USP6NL-201ENST00000277575 HS3ST4Q9Y661 456 aa11.19□□□□□ -0.62
USP6NL-201ENST00000277575 PIRO00625 290 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 GSC2O15499 205 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 ASLP04424 464 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 MAT2AP31153 395 aaKnown RBP11.18□□□□□ -0.62
USP6NL-201ENST00000277575 ST13P50502 369 aaKnown RBP11.18□□□□□ -0.62
USP6NL-201ENST00000277575 ECT2LQ008S8 904 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 DGKKQ5KSL6 1271 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 CCNYL2Q5T2Q4 361 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 ZNF572Q7Z3I7 529 aaPredicted RBP11.18□□□□□ -0.62
USP6NL-201ENST00000277575 FGD2Q7Z6J4 655 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 ARMC8Q8IUR7 673 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 MPP5Q8N3R9 675 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 LEMD2Q8NC56 503 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 RBM15BQ8NDT2 890 aaKnown RBP11.18□□□□□ -0.62
USP6NL-201ENST00000277575 SRFBP1Q8NEF9 429 aaKnown RBP11.18□□□□□ -0.62
USP6NL-201ENST00000277575 WFIKKN2Q8TEU8 576 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 TRIB2Q92519 343 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 RAD51AP1Q96B01 352 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 SUV39H2Q9H5I1 410 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 C3orf14Q9HBI5 128 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 CRTAC1Q9NQ79 661 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 POLR3BQ9NW08 1133 aaPredicted RBP11.18□□□□□ -0.62
USP6NL-201ENST00000277575 FETUBQ9UGM5 382 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 KIAA0100Q14667 2235 aaKnown RBP11.18□□□□□ -0.62
USP6NL-201ENST00000277575 TCRBV7S3A2A0A539 114 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 AP3D1O14617 1153 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 SUV39H1O43463 412 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 PDE9AO76083 593 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 RASGRP1O95267 797 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 CAPN1P07384 714 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 ASMTP46597 345 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 USP46P62068 366 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 SLC25A11Q02978 314 aaKnown RBP11.18□□□□□ -0.62
USP6NL-201ENST00000277575 FAM182AQ5T1J6 154 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 CDC73Q6P1J9 531 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 SERINC5Q86VE9 423 aa11.18□□□□□ -0.62
USP6NL-201ENST00000277575 FITM2Q8N6M3 262 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms